RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TRAPPC2BP0DI82 140 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 OR13C7P0DN81 318 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 MFAP2P55001 183 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 PIGPP57054 158 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 TAS2R19P59542 299 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 IL18Q14116 193 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 IZUMO4Q1ZYL8 232 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 SCGB2B2Q4G0G5 96 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 STEAP1BQ6NZ63 245 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 ARRDC1Q8N5I2 433 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 OR1L8Q8NGR8 309 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 SEC22AQ96IW7 307 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 ZC4H2Q9NQZ6 224 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 NOL3O60936 208 aaKnown RBP10.84□□□□□ -0.67
UBE3B-206ENST00000536398 SNAPC5O75971 98 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 DHFRP00374 187 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 SERPINE2P07093 398 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 FGF2P09038 288 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 HIST1H1BP16401 226 aaKnown RBP10.84□□□□□ -0.67
UBE3B-206ENST00000536398 TBPP20226 339 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 PTBP1P26599 531 aaKnown RBP eCLIP10.84□□□□□ -0.67
UBE3B-206ENST00000536398 S100GP29377 79 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 TNFSF8P32971 234 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 RND3P61587 244 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 DCTN2Q13561 401 aaKnown RBP10.84□□□□□ -0.67
UBE3B-206ENST00000536398 TATDN3Q17R31 274 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 SP6Q3SY56 376 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 CADM3Q8N126 398 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 OR13C8Q8NGS7 320 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 TERB2Q8NHR7 220 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 MARCH1Q8TCQ1 289 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 SMIM4Q8WVI0 70 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 EEF1AKMT3Q96AZ1 226 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 TP53RKQ96S44 253 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 SOSTQ9BQB4 213 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 SRSF8Q9BRL6 282 aaKnown RBP10.84□□□□□ -0.67
UBE3B-206ENST00000536398 NXF2Q9GZY0 626 aaKnown RBP10.84□□□□□ -0.67
UBE3B-206ENST00000536398 FAM212BQ9NTI7 297 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-206ENST00000536398 SELENOKQ9Y6D0 94 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 SMAD5-AS1Q9Y6J3 95 aa10.84□□□□□ -0.67
UBE3B-206ENST00000536398 IGHV3-21A0A0B4J1V1 117 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 CTDSPLO15194 276 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 GGCTO75223 188 aaKnown RBP10.83□□□□□ -0.68
UBE3B-206ENST00000536398 IGKV1-5P01602 117 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 CLEC3BP05452 202 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 ARL3P36405 182 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 MECP2P51608 486 aaKnown RBP10.83□□□□□ -0.68
UBE3B-206ENST00000536398 SLC25A24Q6NUK1 477 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 H2BFWTQ7Z2G1 175 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 Q8N1Y9 231 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 GDPD1Q8N9F7 314 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 TMEM14BQ9NUH8 114 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 PRNDQ9UKY0 176 aa10.83□□□□□ -0.68
UBE3B-206ENST00000536398 C15orf61A6NNL5 157 aa10.82□□□□□ -0.68
UBE3B-206ENST00000536398 MRPS10P82664 201 aaKnown RBP10.82□□□□□ -0.68
UBE3B-206ENST00000536398 OR4C16Q8NGL9 310 aa10.82□□□□□ -0.68
UBE3B-206ENST00000536398 OR4A16Q8NH70 328 aa10.82□□□□□ -0.68
UBE3B-206ENST00000536398 MCFD2Q8NI22 146 aa10.82□□□□□ -0.68
UBE3B-206ENST00000536398 ZNF502Q8TBZ5 544 aa10.82□□□□□ -0.68
UBE3B-206ENST00000536398 LSM10Q969L4 123 aaKnown RBP10.82□□□□□ -0.68
UBE3B-206ENST00000536398 ZNF486Q96H40 463 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-206ENST00000536398 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-206ENST00000536398 PEMTQ9UBM1 199 aa10.82□□□□□ -0.68
UBE3B-206ENST00000536398 IGHV3-35A0A0C4DH35 117 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 C3orf85A0A1B0GTC6 90 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 ZNF320A2RRD8 509 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 C2orf70A6NJV1 201 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 H0Y980 276 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 FOLR2P14207 255 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 SSBP1Q04837 148 aaKnown RBP10.81□□□□□ -0.68
UBE3B-206ENST00000536398 SPINK9Q5DT21 86 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 GPHB5Q86YW7 130 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 SBSPONQ8IVN8 264 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 ZFAND1Q8TCF1 268 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 CACNG8Q8WXS5 425 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 CXorf58Q96LI9 332 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 THAP7Q9BT49 309 aaPredicted RBP10.81□□□□□ -0.68
UBE3B-206ENST00000536398 SIGLEC8Q9NYZ4 499 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 COPZ2Q9P299 210 aa10.81□□□□□ -0.68
UBE3B-206ENST00000536398 F11RQ9Y624 299 aaKnown RBP10.81□□□□□ -0.68
UBE3B-206ENST00000536398 TRBV7-1A0A0A6YYK4 115 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 ANKRD20A5PA0PJZ0 165 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 FABP12A6NFH5 140 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 CCDC160A6NGH7 325 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 GSTZ1O43708 216 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-206ENST00000536398 CTSDP07339 412 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-206ENST00000536398 FRMD6-AS1P0C7T7 363 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 P0C879 139 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 AKAIN1P0CW23 69 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 GPR183P32249 361 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 MEF2DQ14814 521 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 CD300EQ496F6 205 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-206ENST00000536398 FAM209BQ5JX69 171 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 THOC7Q6I9Y2 204 aaKnown RBP10.8□□□□□ -0.68
UBE3B-206ENST00000536398 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 HSD17B13Q7Z5P4 300 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-206ENST00000536398 OR51S1Q8NGJ8 323 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 OR5B3Q8NH48 314 aa10.8□□□□□ -0.68
UBE3B-206ENST00000536398 TSC22D3Q99576 134 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms