RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 STHQ8IWL8 128 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 DRAM1Q8N682 238 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 OR5P3Q8WZ94 311 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 NABP2Q9BQ15 211 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 NPIPB11E5RHQ5 1161 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 CNTFRP26992 372 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 C1orf162Q8NEQ5 155 aaPredicted RBP10.69□□□□□ -0.7
SPG11-203ENST00000535302 SCARF2Q96GP6 870 aaPredicted RBP10.69□□□□□ -0.7
SPG11-203ENST00000535302 Q96M66 194 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 TRBV5-7A0A0A0MS05 114 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 H2BFSP57053 126 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 ALKBH7Q9BT30 221 aaPredicted RBP10.69□□□□□ -0.7
SPG11-203ENST00000535302 GNG5P63218 68 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 TCF24Q7RTU0 167 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 TMEM183AQ8IXX5 376 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 ZNF414Q96IQ9 312 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 SYNGR3O43761 229 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 UQCR10Q9UDW1 63 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 HOXD4P09016 255 aaPredicted RBP10.69□□□□□ -0.7
SPG11-203ENST00000535302 TRGC1P0CF51 173 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 CDC42EP3Q9UKI2 254 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 LYNX1G3V0Z9 82 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 LYNX1P0DP58 116 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 RND3P61587 244 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 ZNF660Q6AZW8 331 aaPredicted RBP10.68□□□□□ -0.7
SPG11-203ENST00000535302 REC114Q7Z4M0 266 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 SFXN3Q9BWM7 321 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 SEMA5BQ9P283 1151 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 CHCHD2Q9Y6H1 151 aaPredicted RBP10.68□□□□□ -0.7
SPG11-203ENST00000535302 COL5A3P25940 1745 aaPredicted RBP10.68□□□□□ -0.7
SPG11-203ENST00000535302 RGPD3A6NKT7 1758 aaPredicted RBP10.68□□□□□ -0.7
SPG11-203ENST00000535302 CD7P09564 240 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 MESP1Q9BRJ9 268 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 APC2O95996 2303 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 IGFBP2P18065 325 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 TSPOP30536 169 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 UBE2DNLQ8IWF7 75 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 GDF15Q99988 308 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 FNDC4Q9H6D8 234 aaPredicted RBP10.68□□□□□ -0.7
SPG11-203ENST00000535302 FBXL7Q9UJT9 491 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 COX19Q49B96 90 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 FBLN7Q53RD9 439 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 NPIPB4C9JG80 1138 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 LIPFP07098 398 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 FAM209AQ5JX71 171 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 C12orf54Q6X4T0 127 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 PUSL1Q8N0Z8 303 aaKnown RBP10.68□□□□□ -0.7
SPG11-203ENST00000535302 STPG2Q8N412 459 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 OR9G1Q8NH87 305 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 ZNF703Q9H7S9 590 aaPredicted RBP10.68□□□□□ -0.7
SPG11-203ENST00000535302 NXT2Q9NPJ8 142 aaKnown RBP10.68□□□□□ -0.7
SPG11-203ENST00000535302 TCF19Q9Y242 345 aa10.68□□□□□ -0.7
SPG11-203ENST00000535302 TRAV2A0A0B4J234 112 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 LINC00862A6NCI5 91 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 CECR9P0C854 216 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 HSPE1P61604 102 aaKnown RBP10.67□□□□□ -0.7
SPG11-203ENST00000535302 FANCMQ8IYD8 2048 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 VGLL1Q99990 258 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 PKIBQ9C010 78 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 TRAV8-2A0A0B4J237 113 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 TDGF1P3P51864 188 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 TMEM187Q14656 261 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 SERF2P84101 59 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 CTHRC1Q96CG8 243 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
SPG11-203ENST00000535302 LY6DQ14210 128 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 LINC01590Q5TEZ4 76 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 TEX45Q8NA69 505 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 PRELID3AQ96N28 172 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 C7orf69Q9H7B7 122 aa10.67□□□□□ -0.7
SPG11-203ENST00000535302 ASIPP42127 132 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 PCP4P48539 62 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 CYP2G1PQ6ZSU1 146 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 TCF23Q7RTU1 214 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 LEPP41159 167 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 ZP1P60852 638 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 OR11H4Q8NGC9 324 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 C7orf66A4D0T2 115 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 JPT1Q9UK76 154 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 TMEM42Q69YG0 159 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 RTN4RL2Q86UN3 420 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 IGHV3-53P01767 116 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 SRSF7Q16629 238 aaKnown RBP eCLIP10.66□□□□□ -0.7
SPG11-203ENST00000535302 C1orf100Q5SVJ3 147 aa10.66□□□□□ -0.7
SPG11-203ENST00000535302 APOBEC3AP31941 199 aaPredicted RBP10.65□□□□□ -0.7
SPG11-203ENST00000535302 COLCA1Q6ZS62 124 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 TMEM105Q8N8V8 129 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 A0A087WV48 116 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 GCHFRP30047 84 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 LDLRAD2Q5SZI1 272 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 ACP7Q6ZNF0 438 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 CLDND2Q8NHS1 167 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 KIF13BQ9NQT8 1826 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 NUTF2P61970 127 aaKnown RBP10.65□□□□□ -0.7
SPG11-203ENST00000535302 PAX2Q02962 417 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 Q6ZT83 130 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 TNS1Q9HBL0 1735 aaKnown RBP10.65□□□□□ -0.7
SPG11-203ENST00000535302 ZNF98A6NK75 572 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms