RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 IGHV3-43A0A0B4J1X8 118 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SPAARA0A1B0GVQ0 90 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PCP4L1A6NKN8 68 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CEBPZOSA8MTT3 80 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 LINC00587B1AMM8 73 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FNDC10F2Z333 226 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SLC31A2O15432 143 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GGCTO75223 188 aaKnown RBP4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MPDU1O75352 247 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 VENTXO95231 258 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TYMSP04818 313 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 IGHV3-43DP0DP04 118 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PAX1P15863 534 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TIMP3P35625 211 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OPRK1P41145 380 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PSMB3P49720 205 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FABP6P51161 128 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TMEM241Q24JQ0 296 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TMEM30BQ3MIR4 351 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR2B11Q5JQS5 317 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FFAR4Q5NUL3 377 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 STUMQ69YW2 141 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR8G2PQ6IF36 304 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 C1orf87Q8N0U7 546 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR10P1Q8NGE3 313 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR51G1Q8NGK1 321 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR10G9Q8NGN4 311 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR10G7Q8NGN6 311 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RFESDQ8TAC1 157 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GATAD1Q8WUU5 269 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CORO2AQ92828 525 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 S100PBPQ96BU1 408 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SRD5A3Q9H8P0 318 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SLC25A22Q9H936 323 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CHODLQ9H9P2 273 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CALYQ9NYX4 217 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FZR1Q9UM11 496 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FOXA2Q9Y261 457 aaPredicted RBP4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PLCE1Q9P212 2302 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TTC28Q96AY4 2481 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SPENQ96T58 3664 aaKnown RBP4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TRAV3A0A0B4J244 114 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 C15orf61A6NNL5 157 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TNFRSF13BO14836 293 aaPredicted RBP4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CYB5BO43169 146 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TRGC2P03986 189 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 S100A9P06702 114 aaKnown RBP4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FABP1P07148 127 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SOD3P08294 240 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TRGC1P0CF51 173 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 STAG3L2P0CL84 134 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 STAG3L3P0CL85 134 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CD99P14209 185 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 S100PP25815 95 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GPR12P47775 334 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CDC34P49427 236 aaPredicted RBP4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PDLIM4P50479 330 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF674Q2M3X9 581 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 DEFB109BQ30KR1 87 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 BSXQ3C1V8 233 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ACOT6Q3I5F7 207 aaPredicted RBP4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CT45A1Q5HYN5 189 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PYY3Q5JQD4 70 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 NCMAPQ5T1S8 102 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 C1orf185Q5T7R7 199 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TEX36Q5VZQ5 186 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 C16orf82Q7Z2V1 217 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TMEM144Q7Z5S9 345 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR2Z1Q8NG97 314 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR4X1Q8NH49 305 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CT45A3Q8NHU0 189 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PPP1R35Q8TAP8 253 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GAFA1Q96PS6 74 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR2V2Q96R30 315 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MGST2Q99735 147 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SMIM7Q9BQ49 75 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GGTLC1Q9BX51 225 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FAM234AQ9H0X4 552 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PARLQ9H300 379 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TMEM14BQ9NUH8 114 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TCF19Q9Y242 345 aa4.8□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TNCP24821 2201 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 KBTBD11-OT1A0A1B0GTJ5 212 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF729A6NN14 1252 aaPredicted RBP4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 DEFB108AA8MXU0 73 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 C17orf112F2Z3M2 114 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 INS-IGF2F8WCM5 200 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 M0R1X1 148 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RRHO14718 337 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PAGE4O60829 102 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FCGR3BO75015 233 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FCN3O75636 299 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 IGHV1-46P01743 117 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 NPSP0C0P6 89 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SELLP14151 372 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CD1BP29016 333 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CCKARP32238 428 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SRP14P37108 136 aaKnown RBP4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 THBS3P49746 956 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RAB7AP51149 207 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms