RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-233	ENST00000534636	GDPD1	Q8N9F7	314 aa		13.86	□□□□□ -0.19
CTSB-233	ENST00000534636	TSPAN14	Q8NG11	270 aa		13.86	□□□□□ -0.19
CTSB-233	ENST00000534636	OR1L6	Q8NGR2	347 aa		13.86	□□□□□ -0.19
CTSB-233	ENST00000534636	GGTLC1	Q9BX51	225 aa		13.86	□□□□□ -0.19
CTSB-233	ENST00000534636	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	TRAV25	A0A0B4J276	109 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	MARCH11	A6NNE9	402 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	TRAPPC2	P0DI81	140 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	TRAPPC2B	P0DI82	140 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	ELL	P55199	621 aa	Predicted RBP	13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	TAS2R46	P59540	309 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	KCTD21	Q4G0X4	260 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	ZNF585B	Q52M93	769 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	TMEM69	Q5SWH9	247 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	UNQ9165/PRO28630	Q6UXU0	137 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	CMTM1	Q8IZ96	169 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	VN1R17P	Q8TDU5	208 aa		13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	MRPL27	Q9P0M9	148 aa	Known RBP	13.85	□□□□□ -0.19
CTSB-233	ENST00000534636	TGOLN2	O43493	480 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	OR13C7	P0DN81	318 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	RPA2	P15927	270 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	SLC38A6	Q8IZM9	456 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	OR1L8	Q8NGR8	309 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	OR5H2	Q8NGV7	314 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	LSM10	Q969L4	123 aa	Known RBP	13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	MOB3A	Q96BX8	217 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	HINT2	Q9BX68	163 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	VCX3A	Q9NNX9	186 aa		13.84	□□□□□ -0.19
CTSB-233	ENST00000534636	IGHV3-35	A0A0C4DH35	117 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	OR2T8	A6NH00	312 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	SNAPC5	O75971	98 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	F2R	P25116	425 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	S100G	P29377	79 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	GNRHR	P30968	328 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	RFX2	P48378	723 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	SLC25A24	Q6NUK1	477 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	OR10W1	Q8NGF6	305 aa		13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	BSCL2	Q96G97	398 aa	Predicted RBP	13.83	□□□□□ -0.2
CTSB-233	ENST00000534636	PMP2	P02689	132 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	SERPINE2	P07093	398 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	C8orf88	P0DMB2	117 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	LAMTOR1	Q6IAA8	161 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	SPSB3	Q6PJ21	355 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	DHRS11	Q6UWP2	260 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	OR2C3	Q8N628	320 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	SAMD12	Q8N8I0	201 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	TMEM190	Q8WZ59	177 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	SPAG8	Q99932	426 aa	Predicted RBP	13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	C5orf66	Q9H5L9	145 aa		13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	DAZ1	Q9NQZ3	744 aa	Known RBP	13.82	□□□□□ -0.2
CTSB-233	ENST00000534636	TEX50	A0A1B0GTY4	177 aa		13.81	□□□□□ -0.2
CTSB-233	ENST00000534636	PGLYRP1	O75594	196 aa	Predicted RBP	13.81	□□□□□ -0.2
CTSB-233	ENST00000534636	KRAS	P01116	189 aa		13.81	□□□□□ -0.2
CTSB-233	ENST00000534636	TAS2R20	P59543	309 aa		13.81	□□□□□ -0.2
CTSB-233	ENST00000534636	WT1-AS	Q06250	92 aa		13.81	□□□□□ -0.2
CTSB-233	ENST00000534636	DGCR14	Q96DF8	476 aa	Known RBP	13.81	□□□□□ -0.2
CTSB-233	ENST00000534636	C21orf62	Q9NYP8	219 aa		13.81	□□□□□ -0.2
CTSB-233	ENST00000534636	OR51B2	Q9Y5P1	312 aa		13.81	□□□□□ -0.2
CTSB-233	ENST00000534636	GPR31	O00270	319 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	PRSS3	P35030	304 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	G6PC	P35575	357 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	LPAR6	P43657	344 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	APOC4	P55056	127 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	UBAC2	Q8NBM4	344 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	OR6F1	Q8NGZ6	308 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	FCAMR	Q8WWV6	532 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	TMEM56	Q96MV1	263 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	ATP6V0B	Q99437	205 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	TSC22D3	Q99576	134 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	NDUFA4L2	Q9NRX3	87 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	FKBP11	Q9NYL4	201 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	PRND	Q9UKY0	176 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	ANAPC10	Q9UM13	185 aa		13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	F11R	Q9Y624	299 aa	Known RBP	13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	EPPK1	P58107	5090 aa	Known RBP	13.8	□□□□□ -0.2
CTSB-233	ENST00000534636	NDUFA4	O00483	81 aa		13.79	□□□□□ -0.2
CTSB-233	ENST00000534636	TGFBR1	P36897	503 aa		13.79	□□□□□ -0.2
CTSB-233	ENST00000534636		Q56UQ5	140 aa		13.79	□□□□□ -0.2
CTSB-233	ENST00000534636	OR5B3	Q8NH48	314 aa		13.79	□□□□□ -0.2
CTSB-233	ENST00000534636	C20orf24	Q9BUV8	137 aa		13.79	□□□□□ -0.2
CTSB-233	ENST00000534636	FXYD6	Q9H0Q3	95 aa		13.79	□□□□□ -0.2
CTSB-233	ENST00000534636	NSG2	Q9Y328	171 aa		13.79	□□□□□ -0.2
CTSB-233	ENST00000534636	PLEC	Q15149	4684 aa	Known RBP	13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	IGHV3-21	A0A0B4J1V1	117 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	TSPAN4	O14817	238 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	HRH1	P35367	487 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	RPS19	P39019	145 aa	Known RBP	13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	TSPAN5	P62079	268 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	LSM3	P62310	102 aa	Known RBP	13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	LPCAT3	Q6P1A2	487 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	CADM3	Q8N126	398 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	OVOL2	Q9BRP0	275 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	ALMS1	Q8TCU4	4167 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	HYDIN	Q4G0P3	5121 aa		13.78	□□□□□ -0.2
CTSB-233	ENST00000534636	SMIM31	A0A1B0GVY4	71 aa		13.77	□□□□□ -0.21
CTSB-233	ENST00000534636	OR4C46	A6NHA9	309 aa		13.77	□□□□□ -0.21
CTSB-233	ENST00000534636	NAT1	P18440	290 aa		13.77	□□□□□ -0.21
CTSB-233	ENST00000534636	HLA-DMA	P28067	261 aa		13.77	□□□□□ -0.21

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