RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 RND3P61587 244 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 ATP5G2Q06055 141 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 SPINK9Q5DT21 86 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 STEAP1BQ6NZ63 245 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 MZT2AQ6P582 158 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 CLEC19AQ6UXS0 136 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 UNQ9165/PRO28630Q6UXU0 137 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 SBSPONQ8IVN8 264 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 FAM223AQ8IWN6 122 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 CADM3Q8N126 398 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 NECAP1Q8NC96 275 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 DMBX1Q8NFW5 382 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 OR9G4Q8NGQ1 327 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 RAB2BQ8WUD1 216 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 TRIM63Q969Q1 353 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 TMEM230Q96A57 120 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 USMG5Q96IX5 58 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 B9D2Q9BPU9 175 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 CHRDL1Q9BU40 450 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 WFDC10AQ9H1F0 79 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 C5orf66Q9H5L9 145 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 RANGRFQ9HD47 186 aaPredicted RBP3.83□□□□□ -1.8
USH1C-210ENST00000534556 HRASLSQ9HDD0 168 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 TMEM14BQ9NUH8 114 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 COMMD9Q9P000 198 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 MRPL36Q9P0J6 103 aaKnown RBP3.83□□□□□ -1.8
USH1C-210ENST00000534556 V9GYH0 126 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 A0A0G2JLM5 398 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 ANKRD20A5PA0PJZ0 165 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 TMEM213A2RRL7 107 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 C2orf70A6NJV1 201 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 C15orf61A6NNL5 157 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 CTDSPLO15194 276 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 GSTZ1O43708 216 aaPredicted RBP3.82□□□□□ -1.8
USH1C-210ENST00000534556 RAB3DO95716 219 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 SERPINE2P07093 398 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 TRAPPC2P0DI81 140 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 TRAPPC2BP0DI82 140 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 OR13C7P0DN81 318 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 ADMP35318 185 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 INSL3P51460 131 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 PIGPP57054 158 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 TSPAN5P62079 268 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 SUPT4H1P63272 117 aaKnown RBP3.82□□□□□ -1.8
USH1C-210ENST00000534556 CATR1Q13166 79 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 MLANAQ16655 118 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 TM4SF20Q53R12 229 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 RNASE10Q5GAN6 216 aaKnown RBP3.82□□□□□ -1.8
USH1C-210ENST00000534556 CCDC190Q86UF4 302 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 ZNF429Q86V71 674 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 SLC38A6Q8IZM9 456 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 OR51S1Q8NGJ8 323 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 OR1L8Q8NGR8 309 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 OR4A5Q8NH83 315 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 TERB2Q8NHR7 220 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 VSTM2AQ8TAG5 236 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 ZNF502Q8TBZ5 544 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 GLYATL2Q8WU03 294 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 DIRAS2Q96HU8 199 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 SDHCQ99643 169 aaPredicted RBP3.82□□□□□ -1.8
USH1C-210ENST00000534556 BCL7BQ9BQE9 202 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 QTRT1Q9BXR0 403 aaKnown RBP3.82□□□□□ -1.8
USH1C-210ENST00000534556 GPR61Q9BZJ8 451 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 C6orf62Q9GZU0 229 aaPredicted RBP3.82□□□□□ -1.8
USH1C-210ENST00000534556 FAM212BQ9NTI7 297 aaPredicted RBP3.82□□□□□ -1.8
USH1C-210ENST00000534556 MLXQ9UH92 298 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 GPR132Q9UNW8 380 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 OR51B2Q9Y5P1 312 aa3.82□□□□□ -1.8
USH1C-210ENST00000534556 IGHV3OR16-8A0A075B7F1 116 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 H0Y980 276 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 I3L2K1 104 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 ST8SIA3O43173 380 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 ACTL6BO94805 426 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 TPPPO94811 219 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 LY86O95711 162 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 CLEC3BP05452 202 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 CTSDP07339 412 aaPredicted RBP3.81□□□□□ -1.8
USH1C-210ENST00000534556 FGF2P09038 288 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 CD7P09564 240 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 OR5AC1P0C628 307 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 FRMD6-AS1P0C7T7 363 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 FOLR2P14207 255 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 PGAM2P15259 253 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 ZP3P21754 424 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 UCP1P25874 307 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 CD40LGP29965 261 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 GPR183P32249 361 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 TAS2R19P59542 299 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 CD69Q07108 199 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 KLF9Q13886 244 aaPredicted RBP3.81□□□□□ -1.8
USH1C-210ENST00000534556 IL18Q14116 193 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 MEF2DQ14814 521 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 DEFB114Q30KQ6 69 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 CD300EQ496F6 205 aaPredicted RBP3.81□□□□□ -1.8
USH1C-210ENST00000534556 SCGB2B2Q4G0G5 96 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 PVRIGQ6DKI7 326 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 SLC25A42Q86VD7 318 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 GPHB5Q86YW7 130 aa3.81□□□□□ -1.8
USH1C-210ENST00000534556 SELENOHQ8IZQ5 122 aaKnown RBP3.81□□□□□ -1.8
USH1C-210ENST00000534556 ARRDC1Q8N5I2 433 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms