RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PPP1R1AQ13522 171 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 RBMS2Q15434 407 aaKnown RBP10.84□□□□□ -0.67
VPS11-205ENST00000534551 Q6ZRM9 215 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 SGPP2Q8IWX5 399 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 TTC9CQ8N5M4 171 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 SLC35G3Q8N808 338 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 OR11H1Q8NG94 326 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 OR1L8Q8NGR8 309 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 CCDC32Q9BV29 185 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 SLA2Q9H6Q3 261 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 TMEM14BQ9NUH8 114 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 TBC1D24Q9ULP9 559 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 ZNF257Q9Y2Q1 563 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 DNAH3Q8TD57 4116 aa10.84□□□□□ -0.67
VPS11-205ENST00000534551 A0A0B4J293 547 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 H3BUA1 57 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 NDUFB6O95139 128 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 CDS2O95674 445 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 IGHV3-23P01764 117 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 IGLL1P15814 213 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 CTRB1P17538 263 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 ANXA7P20073 488 aaKnown RBP10.83□□□□□ -0.68
VPS11-205ENST00000534551 CD33P20138 364 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 VAMP1P23763 118 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 FHL3Q13643 280 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 OXLD1Q5BKU9 147 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 CTRB2Q6GPI1 263 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 LINC00299Q6ZSB3 139 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 OR4A16Q8NH70 328 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 DEDD2Q8WXF8 326 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 S100ZQ8WXG8 99 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 RBPMSQ93062 196 aaKnown RBP10.83□□□□□ -0.68
VPS11-205ENST00000534551 GALNT14Q96FL9 552 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 TMEM68Q96MH6 324 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 SCGB3A2Q96PL1 93 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 FANCD2OSQ96PS1 177 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 NDUFA4L2Q9NRX3 87 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 PRNDQ9UKY0 176 aa10.83□□□□□ -0.68
VPS11-205ENST00000534551 C13orf42A0A1B0GVH6 325 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 ANKRD34BA5PLL1 514 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 NAP1L6A6NFF2 107 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 ST8SIA3O43173 380 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 LYRM1O43325 122 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 NDUFB8O95169 186 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 CRYGCP07315 174 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 TRAPPC2P0DI81 140 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 TRAPPC2BP0DI82 140 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 MYCNOSP40205 109 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 MECP2P51608 486 aaKnown RBP10.82□□□□□ -0.68
VPS11-205ENST00000534551 MFAP2P55001 183 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 IFITM3Q01628 133 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 DHODHQ02127 395 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 EXOSC2Q13868 293 aaKnown RBP10.82□□□□□ -0.68
VPS11-205ENST00000534551 ZNF846Q147U1 533 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 ANKRD55Q3KP44 614 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 GPR146Q96CH1 333 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 SLC25A21Q9BQT8 299 aaPredicted RBP10.82□□□□□ -0.68
VPS11-205ENST00000534551 WDR12Q9GZL7 423 aaKnown RBP10.82□□□□□ -0.68
VPS11-205ENST00000534551 CACNG5Q9UF02 275 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 NOTCH1P46531 2555 aa10.82□□□□□ -0.68
VPS11-205ENST00000534551 IGLV11-55A0A075B6I3 123 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 TRBV9A0A0B4J1U6 114 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 MFSD2BA6NFX1 497 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 FGF2P09038 288 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 OR13C7P0DN81 318 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 RUNX1Q01196 453 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 ZNF616Q08AN1 781 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 C15orf32Q32M92 178 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 LYZL2Q7Z4W2 148 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 CADM3Q8N126 398 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 OR1N2Q8NGR9 330 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 LSM10Q969L4 123 aaKnown RBP10.81□□□□□ -0.68
VPS11-205ENST00000534551 RRNAD1Q96FB5 475 aaKnown RBP10.81□□□□□ -0.68
VPS11-205ENST00000534551 TMEM56Q96MV1 263 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 TSC22D3Q99576 134 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 C7orf50Q9BRJ6 194 aaKnown RBP10.81□□□□□ -0.68
VPS11-205ENST00000534551 C20orf85Q9H1P6 137 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 TMEM56-RWDD3S4R434 201 aa10.81□□□□□ -0.68
VPS11-205ENST00000534551 TRAV6A0A075B6T7 132 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 IGHV3-21A0A0B4J1V1 117 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 CENPXA8MT69 81 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 B3GALNT1O75752 331 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 UPK1BO75841 260 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 SLC6A1P30531 599 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 PRCDQ00LT1 54 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 TMEM128Q5BJH2 165 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 SAMD5Q5TGI4 173 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 SLC25A42Q86VD7 318 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 OR52B4Q8NGK2 314 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 OR5B3Q8NH48 314 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 CCDC140Q96MF4 163 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 FBXL7Q9UJT9 491 aa10.8□□□□□ -0.68
VPS11-205ENST00000534551 FAM223BA6NKX1 122 aa10.79□□□□□ -0.68
VPS11-205ENST00000534551 PPP5D1E7EU14 171 aa10.79□□□□□ -0.68
VPS11-205ENST00000534551 BRI3O95415 125 aa10.79□□□□□ -0.68
VPS11-205ENST00000534551 SFT2D2O95562 160 aa10.79□□□□□ -0.68
VPS11-205ENST00000534551 DEFA4P12838 97 aa10.79□□□□□ -0.68
VPS11-205ENST00000534551 UBE2MP61081 183 aaKnown RBP10.79□□□□□ -0.68
VPS11-205ENST00000534551 NMSQ5H8A3 153 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms