RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 MRGPRFQ96AM1 343 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 NAA38Q9BRA0 125 aaKnown RBP5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 GNB1LQ9BYB4 327 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 HILPDAQ9Y5L2 63 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 COL12A1Q99715 3063 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 USP9YO00507 2555 aaPredicted RBP5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 ABCA12Q86UK0 2595 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 TRAV26-1A0A087WT03 109 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 IGLV1-36A0A0B4J1U3 117 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 A0A0G2JLM5 398 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 C22orf46C9J442 243 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 Q0VFX4 171 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 TMEM211Q6ICI0 200 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 MRPL21Q7Z2W9 205 aaKnown RBP5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 SCCPDHQ8NBX0 429 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 OR2M7Q8NG81 312 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 VSTM2AQ8TAG5 236 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 UCN2Q96RP3 112 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 SSBP4Q9BWG4 385 aaPredicted RBP5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 TMEM38BQ9NVV0 291 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 TIMM9Q9Y5J7 89 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 TMEM56-RWDD3S4R434 201 aa5.76□□□□□ -1.49
TGFBR3-209ENST00000532540 A0A1B0GWB2 263 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 PRRG2O14669 202 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 NAPSAO96009 420 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 BGLAPP02818 100 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 F2RP25116 425 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 NMUP48645 174 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 CEACAM16Q2WEN9 425 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 PRR30Q53SZ7 412 aaPredicted RBP5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 LYRM7Q5U5X0 104 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 NHLRC2Q8NBF2 726 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 GPR146Q96CH1 333 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 PERPQ96FX8 193 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 VSIRQ9H7M9 311 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 CYSLTR1Q9Y271 337 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 ANKHD1Q8IWZ3 2542 aaKnown RBP5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 PPIAL4EA0A075B759 164 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 FAM231BA6NCW3 169 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 H0Y980 276 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 MRPL33O75394 65 aaKnown RBP5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 ACTL6BO94805 426 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 PATE4P0C8F1 98 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 PPIAL4FP0DN26 164 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 CDAP32320 146 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 CRYBA4P53673 196 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 FXYD3Q14802 87 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 MORN2Q502X0 79 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 IBA57Q5T440 356 aaKnown RBP5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 ZNF525Q8N782 197 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 ZNF519Q8TB69 540 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 SLC25A40Q8TBP6 338 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 RDH5Q92781 318 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 CLEC7AQ9BXN2 247 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 TSSC4Q9Y5U2 329 aaPredicted RBP5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 A0A087X0K7 114 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 PGPEP1LA6NFU8 196 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 AHRRA9YTQ3 701 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 NDUFB8O95169 186 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 LIPFP07098 398 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 SP1P08047 785 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 SMIM17P0DL12 118 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 UCP1P25874 307 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 APOBEC3AP31941 199 aaPredicted RBP5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 TMEM167BQ9NRX6 74 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 MSRB2Q9Y3D2 182 aa5.75□□□□□ -1.49
TGFBR3-209ENST00000532540 NAV2Q8IVL1 2488 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 PSG2P11465 335 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 CD1BP29016 333 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 ATP5G3P48201 142 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 ID3Q02535 119 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 TMEM249Q2WGJ8 235 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 CD300EQ496F6 205 aaPredicted RBP5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 ACSM6Q6P461 480 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 AAED1Q7RTV5 226 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 LSM10Q969L4 123 aaKnown RBP5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 GPHA2Q96T91 129 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 TPPP3Q9BW30 176 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 PLXNA2O75051 1894 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 ATG2AQ2TAZ0 1938 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 GAGE12HA6NDE8 117 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 NUPR1O60356 82 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 LMO1P25800 156 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 CEACAM3P40198 252 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 TCTAP57738 103 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 YPEL3P61236 119 aaPredicted RBP5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 MYBPHQ13203 477 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 TIMM23BQ5SRD1 257 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 MUC15Q8N387 334 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 OR8A1Q8NGG7 326 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 JMJD1CQ15652 2540 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 LOC400499M0QZD8 3231 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 TRAV38-1A0A0B4J264 116 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 ALG1L2C9J202 215 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 TIMP3P35625 211 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 RPL31P62899 125 aaKnown RBP5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 ZNF816Q0VGE8 651 aaPredicted RBP5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 POM121L2Q96KW2 1035 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 TTTY12Q9BZ98 90 aa5.74□□□□□ -1.49
TGFBR3-209ENST00000532540 FAM206AQ9NX38 181 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms