RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 SOD3P08294 240 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 SMIM17P0DL12 118 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 GATA2P23769 480 aaPredicted RBP4□□□□□ -1.77
ECHDC1-222ENST00000531967 ZNF140P52738 457 aaPredicted RBP4□□□□□ -1.77
ECHDC1-222ENST00000531967 TIMM50Q3ZCQ8 353 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 ABCA11PQ4W5N1 156 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 DNAJC24Q6P3W2 148 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 ALKAL2Q6UX46 152 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 PRNTQ86SH4 94 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 TCTEX1D1Q8N7M0 179 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 DCAF4L2Q8NA75 395 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 ADAT3Q96EY9 351 aaPredicted RBP4□□□□□ -1.77
ECHDC1-222ENST00000531967 FGFBP2Q9BYJ0 223 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 OCR1Q9BZK8 76 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 OR2H1Q9GZK4 316 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 ASF1BQ9NVP2 202 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 NAT8Q9UHE5 227 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 ANAPC10Q9UM13 185 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 HIGD1AQ9Y241 93 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 BTAF1O14981 1849 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 DOCK6Q96HP0 2047 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 LY75O60449 1722 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 TRAV8-1A0A0A6YYK1 113 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 IGHV7-81A0A0B4J1V7 117 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 EPOPA6NHQ4 379 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 OR12D1P0DN82 309 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 TAF6P49848 677 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 NUDT2P50583 147 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 MP68P56378 58 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 NDUFA6P56556 154 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 SYNJ2BPP57105 145 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 CYCSP99999 105 aaKnown RBP4□□□□□ -1.77
ECHDC1-222ENST00000531967 IQCJQ1A5X6 159 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 RPL22L1Q6P5R6 122 aaKnown RBP4□□□□□ -1.77
ECHDC1-222ENST00000531967 TMEM75Q8N9X5 138 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 OR5A2Q8NGI9 324 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 OR2T27Q8NH04 317 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 ATOH8Q96SQ7 321 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 MIEN1Q9BRT3 115 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 SEC11CQ9BY50 192 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 OR8D2Q9GZM6 311 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 NAT8BQ9UHF3 227 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 LINC00527Q9UJ94 153 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 KLF13Q9Y2Y9 288 aaPredicted RBP4□□□□□ -1.77
ECHDC1-222ENST00000531967 NEUROG3Q9Y4Z2 214 aa4□□□□□ -1.77
ECHDC1-222ENST00000531967 LRRC37AA6NMS7 1700 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 NRXN2Q9P2S2 1712 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 IGKV1-27A0A075B6S5 117 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 A0A087WW49 117 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 IGKV6D-41A0A0C4DH26 115 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 NTN3O00634 580 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 ANGPTL7O43827 346 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 ATP5G3P48201 142 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TAS2R19P59542 299 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 ADIGQ0VDE8 80 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TMEM244Q5VVB8 128 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 ZNF493Q6ZR52 646 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TMEM61Q8N0U2 210 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TMEM243Q9BU79 118 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 GTSF1LQ9H1H1 148 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 PDFQ9HBH1 243 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 ARHGEF17Q96PE2 2063 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 SIP14410 1827 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TMED7-TICAM2A0A0A6YYA0 188 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 OR4C45A6NMZ5 311 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 FABP5P3A8MUU1 101 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 SAP18O00422 153 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 SOCS2O14508 198 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TRAF3IP2O43734 574 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 SRSF10O75494 262 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 POLR2IP36954 125 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 CLLU1OSQ5K130 101 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TMUB2Q71RG4 321 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 NUP37Q8NFH4 326 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 PKMYT1Q99640 499 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TAF9BQ9HBM6 251 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 AIG1Q9NVV5 245 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 TBX21Q9UL17 535 aa3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 F11RQ9Y624 299 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 ZNF646O15015 1829 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-222ENST00000531967 LTBP1Q14766 1721 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 LOC100130705A0A1B0GUX0 176 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 A0A1B0GW64 132 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 F5H5P2 479 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 PAX4O43316 350 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 SIX6O95475 246 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 SCTP09683 121 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 PSG2P11465 335 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 FABP4P15090 132 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 RPS4Y1P22090 263 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 UBE2NP61088 152 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 SNRPFP62306 86 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 HOXC5Q00444 222 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 MMDQ15546 238 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 HRCT1Q6UXD1 115 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 RFLNAQ6ZTI6 216 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 KRTCAP2Q8N6L1 136 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 OR51H1Q8NH63 302 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 ZNF519Q8TB69 540 aa3.98□□□□□ -1.77
ECHDC1-222ENST00000531967 ZNF418Q8TF45 676 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms