RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 FAM223BA6NKX1 122 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 DISC1C4P0D8 188 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 IGKV1-5P01602 117 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 S100GP29377 79 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 C15orf32Q32M92 178 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 PYDC2Q56P42 97 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 IL34Q6ZMJ4 242 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 FAM223AQ8IWN6 122 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 NECAP1Q8NC96 275 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 TRIM63Q969Q1 353 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 QTRT1Q9BXR0 403 aaKnown RBP12.43□□□□□ -0.42
RELA-216ENST00000531238 TMEM14BQ9NUH8 114 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 OR51B2Q9Y5P1 312 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 S4R3C0 116 aa12.43□□□□□ -0.42
RELA-216ENST00000531238 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.42□□□□□ -0.42
RELA-216ENST00000531238 H0Y980 276 aa12.42□□□□□ -0.42
RELA-216ENST00000531238 BMPR1BO00238 502 aa12.42□□□□□ -0.42
RELA-216ENST00000531238 IGHV3-23P01764 117 aa12.42□□□□□ -0.42
RELA-216ENST00000531238 P0C879 139 aa12.42□□□□□ -0.42
RELA-216ENST00000531238 EXOSC2Q13868 293 aaKnown RBP12.42□□□□□ -0.42
RELA-216ENST00000531238 KLF9Q13886 244 aaPredicted RBP12.42□□□□□ -0.42
RELA-216ENST00000531238 OR6Q1Q8NGQ2 317 aa12.42□□□□□ -0.42
RELA-216ENST00000531238 OR1L8Q8NGR8 309 aa12.42□□□□□ -0.42
RELA-216ENST00000531238 A0A0B4J293 547 aa12.41□□□□□ -0.42
RELA-216ENST00000531238 SNAPC5O75971 98 aa12.41□□□□□ -0.42
RELA-216ENST00000531238 SERPINE2P07093 398 aa12.41□□□□□ -0.42
RELA-216ENST00000531238 MFAP2P55001 183 aa12.41□□□□□ -0.42
RELA-216ENST00000531238 Q8N402 240 aa12.41□□□□□ -0.42
RELA-216ENST00000531238 SRSF8Q9BRL6 282 aaKnown RBP12.41□□□□□ -0.42
RELA-216ENST00000531238 SLC2A8Q9NY64 477 aa12.41□□□□□ -0.42
RELA-216ENST00000531238 COPZ2Q9P299 210 aa12.41□□□□□ -0.42
RELA-216ENST00000531238 HUWE1Q7Z6Z7 4374 aaKnown RBP12.41□□□□□ -0.42
RELA-216ENST00000531238 A0A0G2JRQ6 117 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 C15orf61A6NNL5 157 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 PPP5D1E7EU14 171 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 SAP30O75446 220 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 HLA-AP01891 365 aaKnown RBP12.4□□□□□ -0.42
RELA-216ENST00000531238 OR13C7P0DN81 318 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 UCP1P25874 307 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 S100A5P33763 92 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 ETV6P41212 452 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 ECI1P42126 302 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 SYNJ2BPP57105 145 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 H2BFWTQ7Z2G1 175 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 ZNF429Q86V71 674 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 GDPD1Q8N9F7 314 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 LHFPL5Q8TAF8 219 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 GLYATL2Q8WU03 294 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 TMEM230Q96A57 120 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 CCDC140Q96MF4 163 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 PRR25Q96S07 402 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 PRRT1Q99946 306 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 HINT2Q9BX68 163 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 PRNDQ9UKY0 176 aa12.4□□□□□ -0.42
RELA-216ENST00000531238 TEX13DA0A0J9YY54 714 aaPredicted RBP12.39□□□□□ -0.43
RELA-216ENST00000531238 MFSD2BA6NFX1 497 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 OR5AC1P0C628 307 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 DEFA4P12838 97 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 ZP3P21754 424 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 INSL3P51460 131 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 SURF2Q15527 256 aaPredicted RBP12.39□□□□□ -0.43
RELA-216ENST00000531238 Q6ZRM9 215 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 HAPLN4Q86UW8 402 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 CCDC71LQ8N9Z2 235 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 SRRQ9GZT4 340 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 NAA60Q9H7X0 242 aa12.39□□□□□ -0.43
RELA-216ENST00000531238 COL7A1Q02388 2944 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 CRYM-AS1A6NIL9 109 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 OR2C1O95371 312 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 CDS2O95674 445 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 CSN3P07498 182 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
RELA-216ENST00000531238 BAK1Q16611 211 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 DEFB121Q5J5C9 76 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 CLEC19AQ6UXS0 136 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 ADAMTSL5Q6ZMM2 481 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 SELENOHQ8IZQ5 122 aaKnown RBP12.38□□□□□ -0.43
RELA-216ENST00000531238 OR9G4Q8NGQ1 327 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 OR5B3Q8NH48 314 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 OR4A16Q8NH70 328 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 TSC22D3Q99576 134 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 SDHCQ99643 169 aaPredicted RBP12.38□□□□□ -0.43
RELA-216ENST00000531238 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 MCUBQ9NWR8 336 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 FKBP11Q9NYL4 201 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 NDUFA13Q9P0J0 144 aa12.38□□□□□ -0.43
RELA-216ENST00000531238 C14orf166Q9Y224 244 aaKnown RBP12.38□□□□□ -0.43
RELA-216ENST00000531238 DHFRP00374 187 aa12.37□□□□□ -0.43
RELA-216ENST00000531238 EDN2P20800 178 aa12.37□□□□□ -0.43
RELA-216ENST00000531238 HSPE1P61604 102 aaKnown RBP12.37□□□□□ -0.43
RELA-216ENST00000531238 TRIM16LQ309B1 348 aa12.37□□□□□ -0.43
RELA-216ENST00000531238 SPINK9Q5DT21 86 aa12.37□□□□□ -0.43
RELA-216ENST00000531238 THOC7Q6I9Y2 204 aaKnown RBP12.37□□□□□ -0.43
RELA-216ENST00000531238 SLC25A24Q6NUK1 477 aa12.37□□□□□ -0.43
RELA-216ENST00000531238 TOMM5Q8N4H5 51 aa12.37□□□□□ -0.43
RELA-216ENST00000531238 LSM10Q969L4 123 aaKnown RBP12.37□□□□□ -0.43
RELA-216ENST00000531238 PRR13Q9NZ81 148 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms