RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SYNJ2BPP57105 145 aa10.84□□□□□ -0.67
CAPN1-212ENST00000527887 TSPAN5P62079 268 aa10.84□□□□□ -0.67
CAPN1-212ENST00000527887 RPL30P62888 115 aaKnown RBP10.84□□□□□ -0.67
CAPN1-212ENST00000527887 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
CAPN1-212ENST00000527887 EIF4EBP1Q13541 118 aaPredicted RBP10.84□□□□□ -0.67
CAPN1-212ENST00000527887 IL34Q6ZMJ4 242 aa10.84□□□□□ -0.67
CAPN1-212ENST00000527887 Q8N1Y9 231 aa10.84□□□□□ -0.67
CAPN1-212ENST00000527887 OR2K2Q8NGT1 345 aa10.84□□□□□ -0.67
CAPN1-212ENST00000527887 TMEM167AQ8TBQ9 72 aa10.84□□□□□ -0.67
CAPN1-212ENST00000527887 RCHY1Q96PM5 261 aa10.84□□□□□ -0.67
CAPN1-212ENST00000527887 DNAH7Q8WXX0 4024 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 HMX3A6NHT5 357 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 PMP2P02689 132 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 UCP3P55916 312 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 RHOGP84095 191 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 OR13C8Q8NGS7 320 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 TCTEX1D2Q8WW35 142 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 GPN1Q9HCN4 374 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-212ENST00000527887 C19orf73Q9NVV2 129 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 EHFQ9NZC4 300 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 ZNF257Q9Y2Q1 563 aa10.83□□□□□ -0.68
CAPN1-212ENST00000527887 HUWE1Q7Z6Z7 4374 aaKnown RBP10.82□□□□□ -0.68
CAPN1-212ENST00000527887 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 TRAV6A0A075B6T7 132 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.82□□□□□ -0.68
CAPN1-212ENST00000527887 IGKV1D-13A0A0B4J2D9 117 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 NPIPB5A8MRT5 1133 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 RBFOX2O43251 390 aaKnown RBP eCLIP10.82□□□□□ -0.68
CAPN1-212ENST00000527887 KBTBD11O94819 623 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 CSN3P07498 182 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 APELAP0DMC3 54 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 IGHV4-30-4P0DP06 118 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 IGKV1-13P0DP09 117 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 TAS2R31P59538 309 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 FAAP20Q6NZ36 180 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 LPCAT3Q6P1A2 487 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 PUSL1Q8N0Z8 303 aaKnown RBP10.82□□□□□ -0.68
CAPN1-212ENST00000527887 OR4A5Q8NH83 315 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 NEURL2Q9BR09 285 aa10.82□□□□□ -0.68
CAPN1-212ENST00000527887 A0A0B4J293 547 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 TRBV12-3P01733 135 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 FGF2P09038 288 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 FCGR2CP31995 323 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 RPL27AP46776 148 aaKnown RBP10.81□□□□□ -0.68
CAPN1-212ENST00000527887 EXOSC2Q13868 293 aaKnown RBP10.81□□□□□ -0.68
CAPN1-212ENST00000527887 KLK9Q2XQG4 91 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 SCGB2B2Q4G0G5 96 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 OR2B11Q5JQS5 317 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 GTSCR1Q86UQ5 136 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 MUC7Q8TAX7 377 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 ZFAND1Q8TCF1 268 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 TM2D3Q9BRN9 247 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 SLC2A9Q9NRM0 540 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 KLK9Q9UKQ9 250 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 GPR132Q9UNW8 380 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 ALG5Q9Y673 324 aa10.81□□□□□ -0.68
CAPN1-212ENST00000527887 RYR3Q15413 4870 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 TEX22C9J3V5 150 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 BMPR1BO00238 502 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 RBMXL2O75526 392 aaKnown RBP10.8□□□□□ -0.68
CAPN1-212ENST00000527887 PPYP01298 95 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 CRYGCP07315 174 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 HIST1H1BP16401 226 aaKnown RBP10.8□□□□□ -0.68
CAPN1-212ENST00000527887 BRWD1-AS2P59051 145 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 CATR1Q13166 79 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 C15orf32Q32M92 178 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 AADACL3Q5VUY0 350 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 HAPLN4Q86UW8 402 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 CD300LFQ8TDQ1 290 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 MRGPRFQ96AM1 343 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 ZNF486Q96H40 463 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-212ENST00000527887 BET1LQ9NYM9 111 aa10.8□□□□□ -0.68
CAPN1-212ENST00000527887 GGCTO75223 188 aaKnown RBP10.79□□□□□ -0.68
CAPN1-212ENST00000527887 HPRT1P00492 218 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 PRH1P02810 166 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 IL6RP08887 468 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-212ENST00000527887 RRAS2P62070 204 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-212ENST00000527887 RPL8P62917 257 aaKnown RBP10.79□□□□□ -0.68
CAPN1-212ENST00000527887 TMEM128Q5BJH2 165 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 C10orf55Q5SWW7 151 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 VKORC1L1Q8N0U8 176 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 SPAG16Q8N0X2 631 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 SECTM1Q8WVN6 248 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 MOB3AQ96BX8 217 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 FYTTD1Q96QD9 318 aaKnown RBP10.79□□□□□ -0.68
CAPN1-212ENST00000527887 CITED4Q96RK1 184 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 SRSF8Q9BRL6 282 aaKnown RBP10.79□□□□□ -0.68
CAPN1-212ENST00000527887 ZNF2Q9BSG1 426 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-212ENST00000527887 SLC5A7Q9GZV3 580 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 CCL28Q9NRJ3 127 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 FBXL7Q9UJT9 491 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 FLVCR2Q9UPI3 526 aa10.79□□□□□ -0.68
CAPN1-212ENST00000527887 LGALS9O00182 355 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 OR2J3O76001 311 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 RLN1P04808 185 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 CTSDP07339 412 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-212ENST00000527887 OR4E1P0C645 316 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 NQO2P16083 231 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 CTRB1P17538 263 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms