RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST1H2BMQ99879 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 SSX3Q99909 188 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 DOK5Q9P104 306 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 PCNX1Q96RV3 2341 aa12.52□□□□□ -0.4
USH1C-207ENST00000527720 SRRM4A7MD48 611 aaKnown RBP12.52□□□□□ -0.41
USH1C-207ENST00000527720 H7BYZ3 331 aa12.52□□□□□ -0.41
USH1C-207ENST00000527720 ARL14EPLP0DKL9 152 aa12.52□□□□□ -0.41
USH1C-207ENST00000527720 C2orf83Q53S99 150 aa12.52□□□□□ -0.41
USH1C-207ENST00000527720 STPG3Q8N7X2 389 aa12.52□□□□□ -0.41
USH1C-207ENST00000527720 CCL17Q92583 94 aa12.52□□□□□ -0.41
USH1C-207ENST00000527720 OR5B12Q96R08 314 aa12.52□□□□□ -0.41
USH1C-207ENST00000527720 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.41
USH1C-207ENST00000527720 TNCP24821 2201 aa12.52□□□□□ -0.41
USH1C-207ENST00000527720 TEX50A0A1B0GTY4 177 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 FCN3O75636 299 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 SAA1P0DJI8 122 aaPredicted RBP12.51□□□□□ -0.41
USH1C-207ENST00000527720 FOSL1P15407 271 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 CCL3L1P16619 93 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 PRR20EP86478 221 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 PRR20CP86479 221 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 PRR20DP86480 221 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 PRR20BP86481 221 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 PRR20AP86496 221 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 OR51G1Q8NGK1 321 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 OR1L8Q8NGR8 309 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 TMEM186Q96B77 213 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 HINT2Q9BX68 163 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 DYNLRB1Q9NP97 96 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 ARFGEF3Q5TH69 2177 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 E7EQL1 145 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 INS-IGF2F8WCM5 200 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 H0YJW9 148 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 CLN5O75503 358 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 CD99P14209 185 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 NPPCP23582 126 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 NDUFA6P56556 154 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 EFNB3Q15768 340 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 CST9LP1Q5W188 147 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 TMEM144Q7Z5S9 345 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 DMRTC2Q8IXT2 367 aaPredicted RBP12.51□□□□□ -0.41
USH1C-207ENST00000527720 OR4A5Q8NH83 315 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 ABHD5Q8WTS1 349 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 SSMEM1Q8WWF3 244 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 TMEM204Q9BSN7 226 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 MRPL20Q9BYC9 149 aaKnown RBP12.51□□□□□ -0.41
USH1C-207ENST00000527720 SRD5A3Q9H8P0 318 aa12.51□□□□□ -0.41
USH1C-207ENST00000527720 MAP1BP46821 2468 aaKnown RBP12.5□□□□□ -0.41
USH1C-207ENST00000527720 ELOA3CA0A087WX78 387 aaPredicted RBP12.5□□□□□ -0.41
USH1C-207ENST00000527720 MT-CO2P00403 227 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 APOBEC3AP31941 199 aaPredicted RBP12.5□□□□□ -0.41
USH1C-207ENST00000527720 GALR1P47211 349 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 GNB1P62873 340 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 PRR30Q53SZ7 412 aaPredicted RBP12.5□□□□□ -0.41
USH1C-207ENST00000527720 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 HARBI1Q96MB7 349 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 ZNRD1Q9P1U0 126 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 A0A087X0M5 115 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 A0A1B0GX30 115 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 MYOD1P15172 320 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 ATP5G3P48201 142 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 UBE2G2P60604 165 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 VSTM2AQ8TAG5 236 aa12.5□□□□□ -0.41
USH1C-207ENST00000527720 H1FXQ92522 213 aaKnown RBP12.5□□□□□ -0.41
USH1C-207ENST00000527720 FLYWCH2Q96CP2 140 aaKnown RBP12.5□□□□□ -0.41
USH1C-207ENST00000527720 B9A039 149 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 PHOX2AO14813 284 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 USF1P22415 310 aaPredicted RBP12.49□□□□□ -0.41
USH1C-207ENST00000527720 SRP14P37108 136 aaKnown RBP12.49□□□□□ -0.41
USH1C-207ENST00000527720 ZNF137PP52743 207 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 LYPD2Q6UXB3 125 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 OR4C13Q8NGP0 309 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 OR10X1Q8NGY0 326 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 SLC35E1Q96K37 410 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 PCGF1Q9BSM1 259 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 ARL2-SNX15V9GYD0 113 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 ATMQ13315 3056 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 DVL1O14640 695 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 TRGC1P0CF51 173 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 IGFBP2P18065 325 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 LOXP28300 417 aaPredicted RBP12.49□□□□□ -0.41
USH1C-207ENST00000527720 GCHFRP30047 84 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 DLX6P56179 175 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 LINC01551Q86U37 167 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 COMMD5Q9GZQ3 224 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 CHODLQ9H9P2 273 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 NDUFA4L2Q9NRX3 87 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 SLC45A2Q9UMX9 530 aa12.49□□□□□ -0.41
USH1C-207ENST00000527720 PPP1R2P9O14990 202 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 CD3EP07766 207 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 LINC00869P0C866 280 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 RNASE2P10153 161 aaKnown RBP12.48□□□□□ -0.41
USH1C-207ENST00000527720 RPL8P62917 257 aaKnown RBP12.48□□□□□ -0.41
USH1C-207ENST00000527720 SLC16A13Q7RTY0 426 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 PNKDQ8N490 385 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 TMEM167AQ8TBQ9 72 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 FRZBQ92765 325 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 ST6GALNAC6Q969X2 333 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 NABP2Q9BQ15 211 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms