RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 RPL31P62899 125 aaKnown RBP9.57□□□□□ -0.88
LINC01001-201ENST00000526704 HLA-DRB5Q30154 266 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.57□□□□□ -0.88
LINC01001-201ENST00000526704 OR10G8Q8NGN5 311 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 C11orf52Q96A22 123 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 ATG101Q9BSB4 218 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 NUPR1O60356 82 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 IGFBP2P18065 325 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 RPL29P47914 159 aaKnown RBP9.57□□□□□ -0.88
LINC01001-201ENST00000526704 KLF3P57682 345 aaPredicted RBP9.57□□□□□ -0.88
LINC01001-201ENST00000526704 YPEL3P61236 119 aaPredicted RBP9.57□□□□□ -0.88
LINC01001-201ENST00000526704 PRR20EP86478 221 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 PRR20CP86479 221 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 PRR20DP86480 221 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 PRR20BP86481 221 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 PRR20AP86496 221 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 ZNF439Q8NDP4 499 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 FAM222BQ8WU58 562 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 NEUROG1Q92886 237 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 NCOR1P1Q9H4R4 102 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 ASCL3Q9NQ33 180 aa9.57□□□□□ -0.88
LINC01001-201ENST00000526704 KBTBD11-OT1A0A1B0GTJ5 212 aa9.56□□□□□ -0.88
LINC01001-201ENST00000526704 MBD3L4A6NDZ8 208 aaPredicted RBP9.56□□□□□ -0.88
LINC01001-201ENST00000526704 MBD3L3A6NE82 208 aaPredicted RBP9.56□□□□□ -0.88
LINC01001-201ENST00000526704 MBD3L5A6NJ08 208 aaPredicted RBP9.56□□□□□ -0.88
LINC01001-201ENST00000526704 ARL6IP6Q8N6S5 226 aa9.56□□□□□ -0.88
LINC01001-201ENST00000526704 MBD3L2Q8NHZ7 208 aaPredicted RBP9.56□□□□□ -0.88
LINC01001-201ENST00000526704 IQCJQ1A5X6 159 aa9.56□□□□□ -0.88
LINC01001-201ENST00000526704 VHLLQ6RSH7 139 aa9.56□□□□□ -0.88
LINC01001-201ENST00000526704 LYG1Q8N1E2 194 aa9.56□□□□□ -0.88
LINC01001-201ENST00000526704 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
LINC01001-201ENST00000526704 C9JCJ5 164 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 LINC00869P0C866 280 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 GLRXP35754 106 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 MRPS11P82912 194 aaKnown RBP9.55□□□□□ -0.88
LINC01001-201ENST00000526704 POU2AF1Q16633 256 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 ZNF474Q6S9Z5 364 aaPredicted RBP9.55□□□□□ -0.88
LINC01001-201ENST00000526704 MIR17HGQ75NE6 70 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 OR4P4Q8NGL7 312 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 ZCCHC14Q8WYQ9 949 aaKnown RBP9.55□□□□□ -0.88
LINC01001-201ENST00000526704 FAM122AQ96E09 287 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 ENY2Q9NPA8 101 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 IL36BQ9NZH7 164 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 TP53TG3Q9ULZ0 132 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 OR51B2Q9Y5P1 312 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 BOD1L1Q8NFC6 3051 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 IGLV3-9A0A075B6K5 115 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 TRGV10A0A0A0MS01 117 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 M0R143 59 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 SLC17A3O00476 420 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 CRYABP02511 175 aaKnown RBP9.55□□□□□ -0.88
LINC01001-201ENST00000526704 CBLN1P23435 193 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 GATA4P43694 442 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 GNG10P50151 68 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 STUMQ69YW2 141 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 GAFA1Q96PS6 74 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 HINT2Q9BX68 163 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 FKBP11Q9NYL4 201 aa9.55□□□□□ -0.88
LINC01001-201ENST00000526704 TRAV9-1A0A075B6T8 112 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 GRIFINA4D1Z8 144 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 FNDC10F2Z333 226 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 ACTL6BO94805 426 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 MT-CO2P00403 227 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 AREGP15514 252 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 ZNF25P17030 456 aaPredicted RBP9.54□□□□□ -0.88
LINC01001-201ENST00000526704 LINC00310P59036 64 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 SELENOTP62341 195 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 RAB31Q13636 194 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 C21orf62-AS1Q17RA5 79 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 ANKRD39Q53RE8 183 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 TIMM23BQ5SRD1 257 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 PIP4P1Q86T03 277 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 EAF1Q96JC9 268 aaPredicted RBP9.54□□□□□ -0.88
LINC01001-201ENST00000526704 RAB9BQ9NP90 201 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 LY96Q9Y6Y9 160 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 CUL9Q8IWT3 2517 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 MMP23AO75900 390 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 ZNF90Q03938 601 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 DEFB109BQ30KR1 87 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 MOB3BQ86TA1 216 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 RPRMLQ8N4K4 120 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 UHRF2Q96PU4 802 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 SFXN3Q9BWM7 321 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 GCM1Q9NP62 436 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 SLC25A10Q9UBX3 287 aaPredicted RBP9.54□□□□□ -0.88
LINC01001-201ENST00000526704 SLC45A2Q9UMX9 530 aa9.54□□□□□ -0.88
LINC01001-201ENST00000526704 POLR3KQ9Y2Y1 108 aaPredicted RBP9.54□□□□□ -0.88
LINC01001-201ENST00000526704 IGKV1OR2-108A0A075B7D4 117 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 FTH1P19P0C7X4 201 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 PCP4P48539 62 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 LGALS4P56470 323 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 PRCDQ00LT1 54 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 RNF7Q9UBF6 113 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 PRNDQ9UKY0 176 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 ARL2-SNX15V9GYD0 113 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 SCGB1D1O95968 90 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 TDGF1P3P51864 188 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 FAM216BQ8N7L0 139 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 DEFB124Q8NES8 71 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms