RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 HERV-K104P63124 156 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 PJVKQ0ZLH3 352 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 PNRC1Q12796 327 aaPredicted RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 HERPUD1Q15011 391 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 SCGB2B2Q4G0G5 96 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 CT45A1Q5HYN5 189 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 VAX1Q5SQQ9 334 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 GPR157Q5UAW9 335 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 LPCAT3Q6P1A2 487 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 H1FOOQ8IZA3 346 aaPredicted RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 PNKDQ8N490 385 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 ARRDC1Q8N5I2 433 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 TEX29Q8N6K0 151 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 ADAD2Q8NCV1 583 aaKnown RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 OR11H6Q8NGC7 330 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 OR56B4Q8NH76 319 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 TERB2Q8NHR7 220 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 CT45A3Q8NHU0 189 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 NANPQ8TBE9 248 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 TNFRSF14Q92956 283 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 LEAP2Q969E1 77 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 LHX4Q969G2 390 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 UPRTQ96BW1 309 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 SCGB3A2Q96PL1 93 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 TBX15Q96SF7 602 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 SLC6A7Q99884 636 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 C7orf50Q9BRJ6 194 aaKnown RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 ZNF2Q9BSG1 426 aaPredicted RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 CLEC7AQ9BXN2 247 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 HRASLSQ9HDD0 168 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 SIRT7Q9NRC8 400 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 MCUBQ9NWR8 336 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 OR1A1Q9P1Q5 309 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 SCP2D1Q9UJQ7 156 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 JPT1Q9UK76 154 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 PSG11Q9UQ72 335 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 ANKRD17O75179 2603 aaKnown RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 IGHV3OR16-10A0A075B7F0 116 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 IGHV2-26A0A0B4J1V2 119 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 IGLV9-49A0A0B4J1Y8 123 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 IGHV1-69DA0A0B4J2H0 117 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 A0A1W2PRD5 423 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 A0A1W2PRF3 423 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 A0A1W2PRM7 423 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 LEUTXA8MZ59 168 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 RNASEK-C17orf49H0YIS7 233 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 RAB29O14966 203 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 PLA2G10O15496 165 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 LYRM1O43325 122 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 SLC22A5O76082 557 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 LY6G6DO95868 133 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 PPYP01298 95 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 IGLV1-47P01700 117 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 IGHV1-69P01742 117 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 ARG1P05089 322 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 OR8U9P0C7N5 309 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 FRMD6-AS1P0C7T7 363 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 AADACP22760 399 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 IL3RAP26951 378 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 HTR1DP28221 377 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 CEACAM3P40198 252 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 GNG10P50151 68 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 PPT1P50897 306 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 RAB7AP51149 207 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 FXYD4P59646 89 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 DEFA1P59665 94 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 DEFA3P59666 94 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 SSTP61278 116 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 IFITM3Q01628 133 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 PRB3Q04118 309 aaPredicted RBP3.54□□□□□ -1.84
USP48-211ENST00000526044 FGL1Q08830 312 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 GNMTQ14749 295 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 UTF1Q5T230 341 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 ZNF660Q6AZW8 331 aaPredicted RBP3.54□□□□□ -1.84
USP48-211ENST00000526044 HCP5Q6MZN7 132 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 FAAP20Q6NZ36 180 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 SLC25A48Q6ZT89 311 aaKnown RBP3.54□□□□□ -1.84
USP48-211ENST00000526044 PDZD9Q8IXQ8 264 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 LYG1Q8N1E2 194 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 C8orf31Q8N9H6 132 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 ZNF439Q8NDP4 499 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 OR4D10Q8NGI6 311 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 OR51S1Q8NGJ8 323 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 OR4C16Q8NGL9 310 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 OR10X1Q8NGY0 326 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 OR8U1Q8NH10 309 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 ZFAND1Q8TCF1 268 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 CD300LFQ8TDQ1 290 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 CREB3L1Q96BA8 519 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 MALSU1Q96EH3 234 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 MRPL53Q96EL3 112 aaKnown RBP3.54□□□□□ -1.84
USP48-211ENST00000526044 ABHD14BQ96IU4 210 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 PRRT1Q99946 306 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 SMR3AQ99954 134 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 CABLES2Q9BTV7 478 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 MFFQ9GZY8 342 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 TOLLIPQ9H0E2 274 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 CCL28Q9NRJ3 127 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 PIPOXQ9P0Z9 390 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms