RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 HLA-GP17693 338 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 VDAC2P45880 294 aaPredicted RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 RPL27AP46776 148 aaKnown RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 COMPP49747 757 aaPredicted RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 CRIP2P52943 208 aaPredicted RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 DEFA1P59665 94 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 DEFA3P59666 94 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 RPL8P62917 257 aaKnown RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 WT1-ASQ06250 92 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 ECSCRQ19T08 205 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 PLET1Q6UQ28 207 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 ZNF695Q8IW36 515 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 LGI3Q8N145 548 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 STPG2Q8N412 459 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 LRTM2Q8N967 370 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 UXS1Q8NBZ7 420 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 OR5T1Q8NG75 326 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 CD300LFQ8TDQ1 290 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 CHPT1Q8WUD6 406 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 TMEM170AQ8WVE7 144 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 SRSF12Q8WXF0 261 aaKnown RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 ARPC1AQ92747 370 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 MISP3Q96FF7 219 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 SCGB3A2Q96PL1 93 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 FYTTD1Q96QD9 318 aaKnown RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 PALMDQ9NP74 551 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 NDUFA4L2Q9NRX3 87 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 FAM212BQ9NTI7 297 aaPredicted RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 TMEM14BQ9NUH8 114 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 KIAA1456Q9P272 454 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 RNF114Q9Y508 228 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 MMP24Q9Y5R2 645 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 TRAV41A0A0B4J266 112 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 A0A0B4J2A0 478 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 C7orf66A4D0T2 115 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 CNIH1O95406 144 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 TMEM50AO95807 157 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 IGF1P05019 195 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 CXCL3P19876 107 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 S100GP29377 79 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 AKR1C2P52895 323 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 ERVK-16P61578 105 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 CBX3Q13185 183 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 IL15RAQ13261 267 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 MLANAQ16655 118 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 TATDN3Q17R31 274 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 RGS21Q2M5E4 152 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 AARDQ4LEZ3 155 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 UNQ5815/PRO19632Q6UWF5 114 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 H2BFWTQ7Z2G1 175 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 WFDC3Q8IUB2 231 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 MMD2Q8IY49 270 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 C12orf45Q8N5I9 185 aaPredicted RBP5.05□□□□□ -1.6
CD44-214ENST00000525211 TCTEX1D1Q8N7M0 179 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 MINDY2Q8NBR6 621 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 OR11H7Q8NGC8 314 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 OR4D5Q8NGN0 318 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 SGMS2Q8NHU3 365 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 ABHD5Q8WTS1 349 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 CHAC2Q8WUX2 184 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 ZFAND2BQ8WV99 257 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 IL22RA2Q969J5 263 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 ZNF414Q96IQ9 312 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 MS4A10Q96PG2 267 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 CITED2Q99967 270 aaPredicted RBP5.05□□□□□ -1.6
CD44-214ENST00000525211 HINT2Q9BX68 163 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 MAGT1Q9H0U3 335 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 SHPKQ9UHJ6 478 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 FOXA2Q9Y261 457 aaPredicted RBP5.05□□□□□ -1.6
CD44-214ENST00000525211 KCNIP3Q9Y2W7 256 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 OR51B2Q9Y5P1 312 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 S4R3C0 116 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 STAB1Q9NY15 2570 aa5.05□□□□□ -1.6
CD44-214ENST00000525211 ANK2Q01484 3957 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 hCG_2014768A0A024R1R8 64 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 IGHV3-21A0A0B4J1V1 117 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 A0A1W2PN81 502 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 A0A1W2PRX2 142 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 M0QZK8 103 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 CCNKO75909 580 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 CTRB1P17538 263 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 CHRNA7P36544 502 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 PAX9P55771 341 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 H2BFSP57053 126 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 RPL15P61313 204 aaKnown RBP5.04□□□□□ -1.6
CD44-214ENST00000525211 FCN2Q15485 313 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 Q5BKY6 102 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 CTRB2Q6GPI1 263 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 FOXRED2Q8IWF2 684 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 CADM3Q8N126 398 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 ZBTB8BQ8NAP8 495 aaPredicted RBP5.04□□□□□ -1.6
CD44-214ENST00000525211 OR5AU1Q8NGC0 362 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 OR4F5Q8NH21 305 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 OR4A5Q8NH83 315 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 OR2T6Q8NHC8 308 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 LSM10Q969L4 123 aaKnown RBP5.04□□□□□ -1.6
CD44-214ENST00000525211 DUX3Q96PT4 197 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 P2RX4Q99571 388 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 RBKSQ9H477 322 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 C11orf1Q9H5F2 150 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms