RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 ULBP2Q9BZM5 246 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 SIGLEC8Q9NYZ4 499 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 MMP17Q9ULZ9 603 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 ZNF407Q9C0G0 2248 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 A6NDN8 102 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 HELTA6NFD8 242 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 LINC01546A6NGU7 62 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 LILRA5A6NI73 299 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 SIVA1O15304 175 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 ZNF207O43670 478 aaKnown RBP6.96□□□□□ -1.29
CSMD1-213ENST00000523488 CXorf1O96002 111 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 AZU1P20160 251 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 TFF2Q03403 129 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 OR1F12Q8NHA8 337 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 PPP1R35Q8TAP8 253 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 PLA2G2FQ9BZM2 168 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 PRDM14Q9GZV8 571 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 OR2D2Q9H210 308 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 SH2D2AQ9NP31 389 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 TP73-AS1Q9UF72 201 aa6.96□□□□□ -1.29
CSMD1-213ENST00000523488 VSTM5A8MXK1 200 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 TRAPPC2LH3BP13 241 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 DNPH1O43598 174 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 AGFG2O95081 481 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 FBLP22087 321 aaKnown RBP6.96□□□□□ -1.3
CSMD1-213ENST00000523488 GATA2P23769 480 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-213ENST00000523488 GPR183P32249 361 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 SSTR5P35346 364 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 DEFB133Q30KQ1 61 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 Q6ZS92 163 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 ATP5L2Q7Z4Y8 100 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 DOLPP1Q86YN1 238 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 FGFRL1Q8N441 504 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 OR2K2Q8NGT1 345 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 UBALD1Q8TB05 177 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 NANOS1Q8WY41 292 aaKnown RBP6.96□□□□□ -1.3
CSMD1-213ENST00000523488 ATP6V0BQ99437 205 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 NAA38Q9BRA0 125 aaKnown RBP6.96□□□□□ -1.3
CSMD1-213ENST00000523488 METTL7AQ9H8H3 244 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 SAP30LQ9HAJ7 183 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 PLEKHA3Q9HB20 300 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 HEYLQ9NQ87 328 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-213ENST00000523488 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-213ENST00000523488 KCNIP1Q9NZI2 227 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 MYF5P13349 255 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 HIST1H1AQ02539 215 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-213ENST00000523488 RITA1Q96K30 269 aa6.96□□□□□ -1.3
CSMD1-213ENST00000523488 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-213ENST00000523488 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 FBLL1A6NHQ2 334 aaKnown RBP6.95□□□□□ -1.3
CSMD1-213ENST00000523488 SNAI2O43623 268 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 CELA3BP08861 270 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 HIST1H1EP10412 219 aaKnown RBP6.95□□□□□ -1.3
CSMD1-213ENST00000523488 FASLGP48023 281 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 CAMPP49913 170 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 PPOXP50336 477 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 MFAP2P55001 183 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 SEC11AP67812 179 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 FAM162BQ5T6X4 162 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 PQLC2Q6ZP29 291 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 TMEM190Q8WZ59 177 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 RAB37Q96AX2 223 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 GUCD1Q96NT3 240 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 OR2V2Q96R30 315 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 RNASE7Q9H1E1 156 aaKnown RBP6.95□□□□□ -1.3
CSMD1-213ENST00000523488 C5orf67F2Z3F1 127 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 CKS1BP61024 79 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 ZNF816Q0VGE8 651 aaPredicted RBP6.95□□□□□ -1.3
CSMD1-213ENST00000523488 OR5A2Q8NGI9 324 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.95□□□□□ -1.3
CSMD1-213ENST00000523488 JKAMPQ9P055 326 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 RARRES3Q9UL19 164 aa6.95□□□□□ -1.3
CSMD1-213ENST00000523488 H3BRM9 83 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 ZG16O60844 167 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 THBDP07204 575 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 ABHD17BQ5VST6 288 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 Q6ZS52 159 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 MOB1BQ7L9L4 216 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 CHCHD1Q96BP2 118 aaKnown RBP6.94□□□□□ -1.3
CSMD1-213ENST00000523488 C5orf30Q96GV9 206 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 TRIB1Q96RU8 372 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 TMEM38BQ9NVV0 291 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 ROS1P08922 2347 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 LEPROTL1O95214 131 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 BCL3P20749 454 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 CCNOP22674 350 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 RAB9AP51151 201 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 CENPWQ5EE01 88 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 SLC23A3Q6PIS1 610 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 SSX8Q7RTT4 187 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 TMEM45BQ96B21 275 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 IL36RNQ9UBH0 155 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 IGHV3-20A0A0C4DH32 117 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 IZUMO1RA6ND01 250 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 C15orf62A8K5M9 175 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 K7EP34 96 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 HLA-DRB4P13762 266 aa6.94□□□□□ -1.3
CSMD1-213ENST00000523488 G6PCP35575 357 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms