RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OR1L8Q8NGR8 309 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 TP53RKQ96S44 253 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 COPZ2Q9P299 210 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 KLK9Q9UKQ9 250 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 OR51B2Q9Y5P1 312 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.82■□□□□ 0.12
TRIM35-203ENST00000521253 NDUFB8O95169 186 aa15.82■□□□□ 0.12
TRIM35-203ENST00000521253 CTSDP07339 412 aaPredicted RBP15.82■□□□□ 0.12
TRIM35-203ENST00000521253 DEFA4P12838 97 aa15.82■□□□□ 0.12
TRIM35-203ENST00000521253 THOC7Q6I9Y2 204 aaKnown RBP15.82■□□□□ 0.12
TRIM35-203ENST00000521253 CCDC71LQ8N9Z2 235 aa15.82■□□□□ 0.12
TRIM35-203ENST00000521253 TSC22D3Q99576 134 aa15.82■□□□□ 0.12
TRIM35-203ENST00000521253 NDUFA4L2Q9NRX3 87 aa15.82■□□□□ 0.12
TRIM35-203ENST00000521253 PRNDQ9UKY0 176 aa15.82■□□□□ 0.12
TRIM35-203ENST00000521253 V9GYH0 126 aa15.82■□□□□ 0.12
TRIM35-203ENST00000521253 IGLV11-55A0A075B6I3 123 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 C3orf85A0A1B0GTC6 90 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 DBX1A6NMT0 343 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 BMPR1BO00238 502 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 HIST1H1BP16401 226 aaKnown RBP15.81■□□□□ 0.12
TRIM35-203ENST00000521253 S100A5P33763 92 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 SYNJ2BPP57105 145 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 WT1-ASQ06250 92 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 H2BFWTQ7Z2G1 175 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 OR51S1Q8NGJ8 323 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 PRRT1Q99946 306 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 THAP7Q9BT49 309 aaPredicted RBP15.81■□□□□ 0.12
TRIM35-203ENST00000521253 HINT2Q9BX68 163 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 TMEM14BQ9NUH8 114 aa15.81■□□□□ 0.12
TRIM35-203ENST00000521253 C15orf61A6NNL5 157 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 OR13C7P0DN81 318 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 SURF2Q15527 256 aaPredicted RBP15.8■□□□□ 0.12
TRIM35-203ENST00000521253 RPEL1Q2QD12 228 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 SP6Q3SY56 376 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 PYDC2Q56P42 97 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 DEFB121Q5J5C9 76 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 HSD17B13Q7Z5P4 300 aaPredicted RBP15.8■□□□□ 0.12
TRIM35-203ENST00000521253 CCDC190Q86UF4 302 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 OR5B3Q8NH48 314 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 LSM10Q969L4 123 aaKnown RBP15.8■□□□□ 0.12
TRIM35-203ENST00000521253 OR4C12Q96R67 309 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 PRR25Q96S07 402 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 RTBDNQ9BSG5 229 aaPredicted RBP15.8■□□□□ 0.12
TRIM35-203ENST00000521253 C5orf66Q9H5L9 145 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 FKBP11Q9NYL4 201 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 C14orf166Q9Y224 244 aaKnown RBP15.8■□□□□ 0.12
TRIM35-203ENST00000521253 DMRT1Q9Y5R6 373 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 S4R3C0 116 aa15.8■□□□□ 0.12
TRIM35-203ENST00000521253 IGKV1-5P01602 117 aa15.79■□□□□ 0.12
TRIM35-203ENST00000521253 IGHV3-23P01764 117 aa15.79■□□□□ 0.12
TRIM35-203ENST00000521253 ZNF79Q15937 498 aa15.79■□□□□ 0.12
TRIM35-203ENST00000521253 GDPD1Q8N9F7 314 aa15.79■□□□□ 0.12
TRIM35-203ENST00000521253 OR9G4Q8NGQ1 327 aa15.79■□□□□ 0.12
TRIM35-203ENST00000521253 ELOVL1Q9BW60 279 aa15.79■□□□□ 0.12
TRIM35-203ENST00000521253 SLC2A8Q9NY64 477 aa15.79■□□□□ 0.12
TRIM35-203ENST00000521253 ZNF256Q9Y2P7 627 aaPredicted RBP15.79■□□□□ 0.12
TRIM35-203ENST00000521253 PPP5D1E7EU14 171 aa15.78■□□□□ 0.12
TRIM35-203ENST00000521253 FAM209BQ5JX69 171 aa15.78■□□□□ 0.12
TRIM35-203ENST00000521253 Q8N402 240 aa15.78■□□□□ 0.12
TRIM35-203ENST00000521253 OR4A16Q8NH70 328 aa15.78■□□□□ 0.12
TRIM35-203ENST00000521253 TRIM63Q969Q1 353 aa15.78■□□□□ 0.12
TRIM35-203ENST00000521253 CCDC140Q96MF4 163 aa15.78■□□□□ 0.12
TRIM35-203ENST00000521253 MCUBQ9NWR8 336 aa15.78■□□□□ 0.12
TRIM35-203ENST00000521253 GPR132Q9UNW8 380 aa15.78■□□□□ 0.12
TRIM35-203ENST00000521253 MFSD2BA6NFX1 497 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 P0C879 139 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 UCP1P25874 307 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 KLF9Q13886 244 aaPredicted RBP15.77■□□□□ 0.12
TRIM35-203ENST00000521253 IZUMO4Q1ZYL8 232 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 TRIM16LQ309B1 348 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 IL34Q6ZMJ4 242 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 HAPLN4Q86UW8 402 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 EEF1AKMT3Q96AZ1 226 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 SCP2D1Q9UJQ7 156 aa15.77■□□□□ 0.12
TRIM35-203ENST00000521253 B3GALNT1O75752 331 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 HLA-AP01891 365 aaKnown RBP15.76■□□□□ 0.11
TRIM35-203ENST00000521253 OR5AC1P0C628 307 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 AKR1C2P52895 323 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 TATDN3Q17R31 274 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 CLEC19AQ6UXS0 136 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 OR6Q1Q8NGQ2 317 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 CXorf58Q96LI9 332 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 TMEM56Q96MV1 263 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 NAA60Q9H7X0 242 aa15.76■□□□□ 0.11
TRIM35-203ENST00000521253 DNAH9Q9NYC9 4486 aa15.75■□□□□ 0.11
TRIM35-203ENST00000521253 TEX13DA0A0J9YY54 714 aaPredicted RBP15.75■□□□□ 0.11
TRIM35-203ENST00000521253 ATG12O94817 140 aa15.75■□□□□ 0.11
TRIM35-203ENST00000521253 LY86O95711 162 aa15.75■□□□□ 0.11
TRIM35-203ENST00000521253 SPNP16150 400 aa15.75■□□□□ 0.11
TRIM35-203ENST00000521253 ETV6P41212 452 aa15.75■□□□□ 0.11
TRIM35-203ENST00000521253 MECP2P51608 486 aaKnown RBP15.75■□□□□ 0.11
TRIM35-203ENST00000521253 MFAP2P55001 183 aa15.75■□□□□ 0.11
TRIM35-203ENST00000521253 TMEM222Q9H0R3 208 aa15.75■□□□□ 0.11
TRIM35-203ENST00000521253 THYN1Q9P016 225 aa15.75■□□□□ 0.11
TRIM35-203ENST00000521253 F11RQ9Y624 299 aaKnown RBP15.75■□□□□ 0.11
TRIM35-203ENST00000521253 TRBV7-1A0A0A6YYK4 115 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 A0A0B4J293 547 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 CRYM-AS1A6NIL9 109 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 CYB5BO43169 146 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 GGCTO75223 188 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms