RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 HEYLQ9NQ87 328 aaPredicted RBP8.48□□□□□ -1.05
PDGFRB-207ENST00000520579 TNFRSF18Q9Y5U5 241 aa8.48□□□□□ -1.05
PDGFRB-207ENST00000520579 KIR2DS1A0A191URI9 304 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 DEGS1O15121 323 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 S1PR2O95136 353 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 KIR2DS4P43632 304 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 UBE2NP61088 152 aaKnown RBP8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 RPL31P62899 125 aaKnown RBP8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 KIR2DS1Q14954 304 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 RAB1BQ9H0U4 201 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 IGKV3D-11A0A0A0MRZ8 115 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 A0A0J9YW62 118 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 A0A1B0GX78 115 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 HELTA6NFD8 242 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 CSN3P07498 182 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 GATA2P23769 480 aaPredicted RBP8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 OR2K2Q8NGT1 345 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 LINC00470Q9BZP3 86 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 DECR2Q9NUI1 292 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 THADAQ6YHU6 1953 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 DSPP15924 2871 aaKnown RBP8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 IGHV2-26A0A0B4J1V2 119 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 TMEM250H0YL14 139 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 M0R2Z0 102 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 FOXH1O75593 365 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 TGFAP01135 160 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 FOXG1P55316 489 aaPredicted RBP8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 C12orf54Q6X4T0 127 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 PQLC2Q6ZP29 291 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 PNKDQ8N490 385 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 OR10X1Q8NGY0 326 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 NPCDR1Q9BY65 106 aa8.47□□□□□ -1.05
PDGFRB-207ENST00000520579 MED12LQ86YW9 2145 aa8.46□□□□□ -1.05
PDGFRB-207ENST00000520579 CCL3P10147 92 aa8.46□□□□□ -1.05
PDGFRB-207ENST00000520579 YPEL5P62699 121 aa8.46□□□□□ -1.05
PDGFRB-207ENST00000520579 TMEM147Q9BVK8 224 aa8.46□□□□□ -1.05
PDGFRB-207ENST00000520579 QTRT1Q9BXR0 403 aaKnown RBP8.46□□□□□ -1.05
PDGFRB-207ENST00000520579 SRXN1Q9BYN0 137 aa8.46□□□□□ -1.05
PDGFRB-207ENST00000520579 CACNA1BQ00975 2339 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 CRYBB3P26998 211 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 NTF4P34130 210 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 PI4KAP42356 2102 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 EDDM3AQ14507 147 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 C6orf15Q6UXA7 325 aaPredicted RBP8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 OR5A2Q8NGI9 324 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 OR5B3Q8NH48 314 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 TPPP3Q9BW30 176 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 COL25A1Q9BXS0 654 aaPredicted RBP8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 JKAMPQ9P055 326 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 CD207Q9UJ71 328 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 CA7P43166 264 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF137PP52743 207 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 PSG3Q16557 428 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 DHRS13Q6UX07 377 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 C19orf35Q6ZS72 473 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 H2BFWTQ7Z2G1 175 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 ANKRD37Q7Z713 158 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 ABHD12Q8N2K0 398 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 FOXB1Q99853 325 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 CLEC7AQ9BXN2 247 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 KCNIP1Q9NZI2 227 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 RARRES3Q9UL19 164 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 LSM4Q9Y4Z0 139 aaKnown RBP8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 SPCS1Q9Y6A9 102 aa8.46□□□□□ -1.06
PDGFRB-207ENST00000520579 NPIPB5A8MRT5 1133 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 ZFAND5O76080 213 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 GPX1P07203 203 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 RNFT1Q5M7Z0 435 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 NABP1Q96AH0 204 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 PLEKHA3Q9HB20 300 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 OBP2BQ9NPH6 170 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 IGFBP2P18065 325 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 HIST1H1AQ02539 215 aaPredicted RBP8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 ATP5G2Q06055 141 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 RPEL1Q2QD12 228 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 INO80CQ6PI98 192 aaPredicted RBP8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 OR2T6Q8NHC8 308 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 OR8B2Q96RD0 313 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 MRPL16Q9NX20 251 aaKnown RBP8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 DCHS1Q96JQ0 3298 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 SPINK8P0C7L1 97 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 PSG7Q13046 419 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 COLCA1Q6ZS62 124 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 DRAM1Q8N682 238 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 KIR3DL3Q8N743 410 aa8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 CITED2Q99967 270 aaPredicted RBP8.45□□□□□ -1.06
PDGFRB-207ENST00000520579 INTS1Q8N201 2190 aaKnown RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 PKDREJQ9NTG1 2253 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 WNK2Q9Y3S1 2297 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 A0A087X0K7 114 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 hCG_38984A0A1B0GV85 526 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 C17orf98A8MV24 154 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 RRHO14718 337 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 CGAP01215 116 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms