RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 MRPL3P09001 348 aaKnown RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPIAL4FP0DN26 164 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR13C7P0DN81 318 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGLC2P0DOY2 106 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGLC3P0DOY3 106 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF43P17038 809 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 GABRG2P18507 467 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 SERPINA2P20848 420 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 DTYMKP23919 212 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 FKBP2P26885 142 aaKnown RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 HSD11B1P28845 292 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPL12P30050 165 aaKnown RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OTX1P32242 354 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 CEACAM3P40198 252 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 KIR2DS2P43631 304 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 TAS2R31P59538 309 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 UBE2KP61086 200 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 YPEL3P61236 119 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 RANP62826 216 aaKnown RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 HLA-DRB3P79483 266 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPL18Q07020 188 aaKnown RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 EIF3IQ13347 325 aaKnown RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 EBPQ15125 230 aaKnown RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 LINC01620Q4KN68 170 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 GPR157Q5UAW9 335 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OTPQ5XKR4 325 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 CLEC18BQ6UXF7 455 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 SSX7Q7RTT5 188 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PRSS41Q7RTY9 318 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OOSP2Q86WS3 158 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 UBALD2Q8IYN6 164 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF679Q8IYX0 411 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 CMTM1Q8IZ96 169 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF433Q8N7K0 673 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZIC4Q8N9L1 334 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 SUMF2Q8NBJ7 301 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC26A10Q8NG04 563 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR4D6Q8NGJ1 314 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR4S2Q8NH73 311 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OTOSQ8NHW6 89 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 GPR119Q8TDV5 335 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 RNF138Q8WVD3 245 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 FGF14Q92915 247 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 C8orf44Q96CB5 159 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 TECTBQ96PL2 329 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 TSPAN32Q96QS1 320 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR8B4Q96RC9 309 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 RNF2Q99496 336 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 NICN1Q9BSH3 213 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PBDC1Q9BVG4 233 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 NUDT9Q9BW91 350 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 SH3BGRL3Q9H299 93 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 TXNIPQ9H3M7 391 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 CST9LQ9H4G1 147 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 WDR76Q9H967 626 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 CALHM2Q9HA72 323 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 FAM60AQ9NP50 221 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PRTFDC1Q9NRG1 225 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM106BQ9NUM4 274 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR1A1Q9P1Q5 309 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 ONECUT1Q9UBC0 465 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 GNG8Q9UK08 70 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 MMP17Q9ULZ9 603 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 B9D1Q9UPM9 204 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC7A11Q9UPY5 501 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PSG11Q9UQ72 335 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 MRPS16Q9Y3D3 137 aaKnown RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PCNTO95613 3336 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PRRC2BQ5JSZ5 2229 aaKnown RBP2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 A0A0C4DFX4 3053 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGLV3-12A0A075B6K2 115 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGLV3-32A0A0A0MS00 114 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGLV1-36A0A0B4J1U3 117 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGHV2-26A0A0B4J1V2 119 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGHV1-69-2A0A0G2JMI3 117 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 PRSS37A4D1T9 235 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 MEIS3P1A6NDR6 274 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR5B21A6NL26 309 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 VSTM2BA6NLU5 285 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF705GA8MUZ8 300 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 NPIPA7E9PJI5 369 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 PLPP3O14495 311 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 SCGNO76038 276 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 TNFSF15O95150 251 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 UTS2O95399 124 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 CYB5AP00167 134 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGLV1-47P01700 117 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 REG1AP05451 166 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 GYPBP06028 91 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 MMP7P09237 267 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR5G3P0C626 314 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 NPIPA8P0DM63 369 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 SCGB1A1P11684 91 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 AKR1C4P17516 323 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 PGCP20142 388 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 LCN2P80188 198 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 IL24Q13007 206 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 UNC119Q13432 240 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 MMDQ15546 238 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms