RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CD55P08174 381 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 OR9G9P0C7N8 305 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 CD99P14209 185 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 SSTR5P35346 364 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 OPRK1P41145 380 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 GPR12P47775 334 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 ATP5IP56385 69 aaPredicted RBP4.15□□□□□ -1.75
SDC2-204ENST00000519914 SELENOTP62341 195 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 RAB11AP62491 216 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 C17orf58Q2M2W7 97 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 ACOT6Q3I5F7 207 aaPredicted RBP4.15□□□□□ -1.75
SDC2-204ENST00000519914 COA6Q5JTJ3 125 aaKnown RBP4.15□□□□□ -1.75
SDC2-204ENST00000519914 C1orf185Q5T7R7 199 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 TEX36Q5VZQ5 186 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 NCR3LG1Q68D85 454 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 STUMQ69YW2 141 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 ZNF474Q6S9Z5 364 aaPredicted RBP4.15□□□□□ -1.75
SDC2-204ENST00000519914 LCN15Q6UWW0 184 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 C1orf87Q8N0U7 546 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 HIST3H2BBQ8N257 126 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 ZADH2Q8N4Q0 377 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 ZNF808Q8N4W9 903 aaPredicted RBP4.15□□□□□ -1.75
SDC2-204ENST00000519914 ZNF439Q8NDP4 499 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 DEFB124Q8NES8 71 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 NUP37Q8NFH4 326 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 LHX4Q969G2 390 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 ACY3Q96HD9 319 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 ADTRPQ96IZ2 230 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 PACRGQ96M98 296 aaPredicted RBP4.15□□□□□ -1.75
SDC2-204ENST00000519914 IMMP2LQ96T52 175 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 SRD5A3Q9H8P0 318 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 KCNIP2Q9NS61 270 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 CALYQ9NYX4 217 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 DOK5Q9P104 306 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 RPH3ALQ9UNE2 315 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 FOXA2Q9Y261 457 aaPredicted RBP4.15□□□□□ -1.75
SDC2-204ENST00000519914 LSM4Q9Y4Z0 139 aaKnown RBP4.15□□□□□ -1.75
SDC2-204ENST00000519914 FAM215AQ9Y5M1 114 aa4.15□□□□□ -1.75
SDC2-204ENST00000519914 CACNA1HO95180 2353 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 MUC3AQ02505 3323 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 KBTBD11-OT1A0A1B0GTJ5 212 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 ZFP92A6NM28 416 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 IFITM10A6NMD0 228 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 C15orf61A6NNL5 157 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 CEBPZOSA8MTT3 80 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 ZNF727A8MUV8 499 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 F6UZH7 168 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 CYB5BO43169 146 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 PDE6DO43924 150 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BKO60814 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BJP06899 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 STAG3L3P0CL85 134 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 BMP5P22003 454 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BOP23527 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 CD1BP29016 333 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BBP33778 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 SRP14P37108 136 aaKnown RBP4.14□□□□□ -1.75
SDC2-204ENST00000519914 PLA2G5P39877 138 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 RPS10P46783 165 aaKnown RBP4.14□□□□□ -1.75
SDC2-204ENST00000519914 THBS3P49746 956 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 FABP6P51161 128 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BDP58876 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BCP62807 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 RPL23P62829 140 aaKnown RBP4.14□□□□□ -1.75
SDC2-204ENST00000519914 RPL19P84098 196 aaKnown RBP4.14□□□□□ -1.75
SDC2-204ENST00000519914 TFF3Q07654 80 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 SRSF6Q13247 344 aaKnown RBP4.14□□□□□ -1.75
SDC2-204ENST00000519914 PSG3Q16557 428 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST2H2BEQ16778 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 RNF151Q2KHN1 245 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 FFAR4Q5NUL3 377 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.14□□□□□ -1.75
SDC2-204ENST00000519914 NCMAPQ5T1S8 102 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 C1orf194Q5T5A4 169 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 FAM53AQ6NSI3 398 aaPredicted RBP4.14□□□□□ -1.75
SDC2-204ENST00000519914 FAM71F2Q6NXP2 309 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 ZNF343Q6P1L6 599 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 TMEM183AQ8IXX5 376 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 ZNF709Q8N972 641 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 OR10G9Q8NGN4 311 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 OR10G7Q8NGN6 311 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 OR4S2Q8NH73 311 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 UBALD1Q8TB05 177 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 ZNF596Q8TC21 504 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 TMEM170AQ8WVE7 144 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BHQ93079 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 TMEM18Q96B42 140 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 OR2V2Q96R30 315 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BNQ99877 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 HIST1H2BMQ99879 126 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 TMEM204Q9BSN7 226 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 QTRT1Q9BXR0 403 aaKnown RBP4.14□□□□□ -1.75
SDC2-204ENST00000519914 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 CSTL1Q9H114 145 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 TMEM14BQ9NUH8 114 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 CLN8Q9UBY8 286 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 PSG11Q9UQ72 335 aa4.14□□□□□ -1.75
SDC2-204ENST00000519914 COL6A3P12111 3177 aa4.13□□□□□ -1.75
SDC2-204ENST00000519914 FREM2Q5SZK8 3169 aa4.13□□□□□ -1.75
SDC2-204ENST00000519914 DYSFO75923 2080 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms