RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ZSCAN26Q16670 478 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 RPL22L1Q6P5R6 122 aaKnown RBP2.82□□□□□ -1.96
HTT-210ENST00000512909 METAP1DQ6UB28 335 aaPredicted RBP2.82□□□□□ -1.96
HTT-210ENST00000512909 IL34Q6ZMJ4 242 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 Q8IYB0 196 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 C8orf59Q8N0T1 100 aaPredicted RBP2.82□□□□□ -1.96
HTT-210ENST00000512909 ZNF565Q8N9K5 539 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 LY6G5BQ8NDX9 201 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 OR4D6Q8NGJ1 314 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 OR51A4Q8NGJ6 313 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 OR1L6Q8NGR2 347 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 OR13D1Q8NGV5 346 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 OR10AC1Q8NH08 325 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 SGMS2Q8NHU3 365 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 TNFAIP8L1Q8WVP5 186 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 IL22RA2Q969J5 263 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 ITFG2Q969R8 447 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 OPALINQ96PE5 141 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 PDCD1LG2Q9BQ51 273 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 METTL9Q9H1A3 318 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 TLNRD1Q9H1K6 362 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 IFI27L2Q9H2X8 130 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 METTL8Q9H825 291 aaKnown RBP2.82□□□□□ -1.96
HTT-210ENST00000512909 C19orf12Q9NSK7 152 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 RBFOX1Q9NWB1 397 aaKnown RBP2.82□□□□□ -1.96
HTT-210ENST00000512909 BABAM2Q9NXR7 383 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 SCN3BQ9NY72 215 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 TAS2R4Q9NYW5 299 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 USE1Q9NZ43 259 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 CKLFQ9UBR5 152 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 PRO0461Q9UI25 63 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 CADP27708 2225 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 ROS1P08922 2347 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 HIVEP2P31629 2446 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 TEP1Q99973 2627 aaKnown RBP2.82□□□□□ -1.96
HTT-210ENST00000512909 IGKV1-27A0A075B6S5 117 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 MEIKINA0A087WXM9 373 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 TRAV39A0A0B4J263 110 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 IGKV1-9A0A0C4DH69 117 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 EFCAB10A6NFE3 127 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 TMEM212A6NML5 194 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 OR4C45A6NMZ5 311 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 H0YJX3 145 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 MYL12BO14950 172 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 NOS1APO75052 506 aaPredicted RBP2.81□□□□□ -1.96
HTT-210ENST00000512909 FCN3O75636 299 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 OR2H2O95918 312 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 GAPDHP04406 335 aaKnown RBP2.81□□□□□ -1.96
HTT-210ENST00000512909 ISG15P05161 165 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 CDK2P24941 298 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 CD24P25063 80 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 DCKP27707 260 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 KISS1Q15726 138 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 LRRC75BQ2VPJ9 315 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 ZNF691Q5VV52 312 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 TMEM42Q69YG0 159 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 OR52W1Q6IF63 320 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 AHSA2Q719I0 299 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 LINC01551Q86U37 167 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 KRTAP11-1Q8IUC1 163 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 JAGN1Q8N5M9 183 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 DUSP18Q8NEJ0 188 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 OR4S1Q8NGB4 309 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 OR4C13Q8NGP0 309 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 C17orf50Q8WW18 174 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 GHSRQ92847 366 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 CPNE2Q96FN4 548 aaPredicted RBP2.81□□□□□ -1.96
HTT-210ENST00000512909 ZNF714Q96N38 554 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 CHST5Q9GZS9 411 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 HMG20AQ9NP66 347 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 CCL28Q9NRJ3 127 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 INPP5EQ9NRR6 644 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 CLEC2DQ9UHP7 191 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 ST3GAL6Q9Y274 331 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 ERGIC3Q9Y282 383 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 SIGLEC9Q9Y336 463 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 CR1P17927 2039 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 CHD3Q12873 2000 aaKnown RBP2.81□□□□□ -1.96
HTT-210ENST00000512909 DYSFO75923 2080 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 ADGRG4Q8IZF6 3080 aa2.81□□□□□ -1.96
HTT-210ENST00000512909 IGKV1-12A0A0C4DH73 117 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 A0A1W2PPE3 182 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 LEUTXA8MZ59 168 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 MCRIP1C9JLW8 97 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 CLDN34H7C241 214 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 PEX7O00628 323 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 SULT1B1O43704 296 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 CRTAPO75718 401 aaPredicted RBP2.8□□□□□ -1.96
HTT-210ENST00000512909 OR7C1O76099 320 aaPredicted RBP2.8□□□□□ -1.96
HTT-210ENST00000512909 IGKV1D-12P01611 117 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 IGLV3-1P01715 115 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 LIMS3P0CW19 117 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 LIMS4P0CW20 117 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 IGHV1-8P0DP01 117 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 CELP19835 753 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 CCL1P22362 96 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 HTR1DP28221 377 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 BRS3P32247 399 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms