RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 TRIOBPQ9H2D6 2365 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 ADARB2-AS1A8MUL3 147 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 ZNF883P0CG24 379 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 EFNB1P98172 346 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 RUNX1Q01196 453 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM89BQ8N5H3 189 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 TMEM52Q8NDY8 209 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 A0A087X0M5 115 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 TRAV8-6A0A0B4J262 113 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 TRAV40A0A0B4J280 105 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 A0A1B0GX30 115 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 CTDSPLO15194 276 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 LHBP01229 141 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 HLA-DRB1P01911 266 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 CGB3P0DN86 165 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 KLK2P20151 261 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 CRYBB3P26998 211 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM3BP58499 235 aaPredicted RBP4.91□□□□□ -1.62
USP38-203ENST00000511739 CKS1BP61024 79 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 TEX45Q8NA69 505 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 JPT2Q9H910 190 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 PTPRDP23468 1912 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 CHD5Q8TDI0 1954 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 RRHO14718 337 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 PGLYRP1O75594 196 aaPredicted RBP4.9□□□□□ -1.62
USP38-203ENST00000511739 THBDP07204 575 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 OTX1P32242 354 aaPredicted RBP4.9□□□□□ -1.62
USP38-203ENST00000511739 NABP2Q9BQ15 211 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 GPR132Q9UNW8 380 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 C7orf77A4D0Y5 90 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 FAM71F2Q6NXP2 309 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 LRTM2Q8N967 370 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 SPSB4Q96A44 273 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 HSPB9Q9BQS6 159 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 TSC2P49815 1807 aa4.9□□□□□ -1.62
USP38-203ENST00000511739 A0A1W2PP11 408 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 C1QTNF9BB2RNN3 333 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 TM4SF5O14894 197 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 ZG16O60844 167 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 WNT2P09544 360 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 RCC1P18754 421 aaPredicted RBP4.9□□□□□ -1.63
USP38-203ENST00000511739 PEBP1P30086 187 aaKnown RBP4.9□□□□□ -1.63
USP38-203ENST00000511739 ATP5IP56385 69 aaPredicted RBP4.9□□□□□ -1.63
USP38-203ENST00000511739 HBBP68871 147 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 PMCHL1Q16048 86 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 TMEM95Q3KNT9 176 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 MUC21Q5SSG8 566 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 SPRED2Q7Z698 418 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 SPACA3Q8IXA5 215 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 TAF15Q92804 592 aaKnown RBP eCLIP4.9□□□□□ -1.63
USP38-203ENST00000511739 VCX2Q9H322 139 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 CCDC88CQ9P219 2028 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 THSD7BQ9C0I4 1608 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 FAM90A26D6RGX4 464 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 ARL14EPLP0DKL9 152 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 FOLR2P14207 255 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 SPNP16150 400 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 LIMS1P48059 325 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 ABLIM2Q6H8Q1 611 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 SLC25A47Q6Q0C1 308 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 CYP2G1PQ6ZSU1 146 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 TMEM252Q8N6L7 170 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 EDA2RQ9HAV5 297 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 SCN3AQ9NY46 2000 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 VWA8A3KMH1 1905 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 J3QW42 95 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 CECR9P0C854 216 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 IFI27P40305 119 aaPredicted RBP4.9□□□□□ -1.63
USP38-203ENST00000511739 HAPLN4Q86UW8 402 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 SAXO1Q8IYX7 474 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 OSR1Q8TAX0 266 aaPredicted RBP4.9□□□□□ -1.63
USP38-203ENST00000511739 GATAD1Q8WUU5 269 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 SPSB2Q99619 263 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 GDF15Q99988 308 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 SRXN1Q9BYN0 137 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 TMEM222Q9H0R3 208 aa4.9□□□□□ -1.63
USP38-203ENST00000511739 TRAV14DV4A0A0A6YYC5 116 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 LOC390937A0A1W2PQ73 354 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 E9PQ18 207 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 CA7P43166 264 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 TNFRSF9Q07011 255 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 SNAI3Q3KNW1 292 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 UNQ6494/PRO21346Q6UXR6 183 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 GPR146Q96CH1 333 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 C18orf15Q96N68 181 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 AICDAQ9GZX7 198 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 PARLQ9H300 379 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 MRPL16Q9NX20 251 aaKnown RBP4.89□□□□□ -1.63
USP38-203ENST00000511739 SLC25A15Q9Y619 301 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 CABIN1Q9Y6J0 2220 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 TRGV11A0A075B6L2 103 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 C17orf100A8MU93 164 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 RPL35AP18077 110 aaKnown RBP4.89□□□□□ -1.63
USP38-203ENST00000511739 GPX4P36969 197 aaPredicted RBP4.89□□□□□ -1.63
USP38-203ENST00000511739 UCP3P55916 312 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 ZNF585BQ52M93 769 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 FAM216BQ8N7L0 139 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 OR10S1Q8NGN2 331 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 ST6GAL2Q96JF0 529 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 IGF2P01344 180 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms