RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 HIST1H1BP16401 226 aaKnown RBP18.43■□□□□ 0.54
SRPK1-210ENST00000508473 TNFSF8P32971 234 aa18.43■□□□□ 0.54
SRPK1-210ENST00000508473 RND3P61587 244 aa18.43■□□□□ 0.54
SRPK1-210ENST00000508473 CD69Q07108 199 aa18.43■□□□□ 0.54
SRPK1-210ENST00000508473 DCTN2Q13561 401 aaKnown RBP18.43■□□□□ 0.54
SRPK1-210ENST00000508473 IL34Q6ZMJ4 242 aa18.43■□□□□ 0.54
SRPK1-210ENST00000508473 OR13C8Q8NGS7 320 aa18.43■□□□□ 0.54
SRPK1-210ENST00000508473 MARCH1Q8TCQ1 289 aa18.43■□□□□ 0.54
SRPK1-210ENST00000508473 MRGPRFQ96AM1 343 aa18.43■□□□□ 0.54
SRPK1-210ENST00000508473 ZNF486Q96H40 463 aaPredicted RBP18.43■□□□□ 0.54
SRPK1-210ENST00000508473 SRSF8Q9BRL6 282 aaKnown RBP18.43■□□□□ 0.54
SRPK1-210ENST00000508473 DBX1A6NMT0 343 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 SERPINE2P07093 398 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 WT1-ASQ06250 92 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 CLEC19AQ6UXS0 136 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 SEC22AQ96IW7 307 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 CCDC140Q96MF4 163 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 NXF2Q9GZY0 626 aaKnown RBP18.42■□□□□ 0.54
SRPK1-210ENST00000508473 NDUFA4L2Q9NRX3 87 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 RABL2AQ9UBK7 228 aaPredicted RBP18.42■□□□□ 0.54
SRPK1-210ENST00000508473 PRNDQ9UKY0 176 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 RABL2BQ9UNT1 228 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 DMRT1Q9Y5R6 373 aa18.42■□□□□ 0.54
SRPK1-210ENST00000508473 SORL1Q92673 2214 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 FABP12A6NFH5 140 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 GP9P14770 177 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 PTBP1P26599 531 aaKnown RBP eCLIP18.41■□□□□ 0.54
SRPK1-210ENST00000508473 MEF2DQ14814 521 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 KLK9Q2XQG4 91 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 H2BFWTQ7Z2G1 175 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 CADM3Q8N126 398 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 ZFAND1Q8TCF1 268 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 EEF1AKMT3Q96AZ1 226 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 TP53RKQ96S44 253 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 B9D2Q9BPU9 175 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 COPZ2Q9P299 210 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 KLK9Q9UKQ9 250 aa18.41■□□□□ 0.54
SRPK1-210ENST00000508473 MFSD2BA6NFX1 497 aa18.4■□□□□ 0.54
SRPK1-210ENST00000508473 DISC1C4P0D8 188 aa18.4■□□□□ 0.54
SRPK1-210ENST00000508473 IGLV1-51P01701 117 aa18.4■□□□□ 0.54
SRPK1-210ENST00000508473 CSN3P07498 182 aa18.4■□□□□ 0.54
SRPK1-210ENST00000508473 AKAIN1P0CW23 69 aa18.4■□□□□ 0.54
SRPK1-210ENST00000508473 THOC7Q6I9Y2 204 aaKnown RBP18.4■□□□□ 0.54
SRPK1-210ENST00000508473 OR4C16Q8NGL9 310 aa18.4■□□□□ 0.54
SRPK1-210ENST00000508473 LSM10Q969L4 123 aaKnown RBP18.4■□□□□ 0.54
SRPK1-210ENST00000508473 TSC22D3Q99576 134 aa18.4■□□□□ 0.54
SRPK1-210ENST00000508473 RSL24D1Q9UHA3 163 aaKnown RBP18.4■□□□□ 0.54
SRPK1-210ENST00000508473 C3orf85A0A1B0GTC6 90 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 C15orf61A6NNL5 157 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 H0Y980 276 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 GGCTO75223 188 aaKnown RBP18.39■□□□□ 0.53
SRPK1-210ENST00000508473 OR2C1O95371 312 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 MECP2P51608 486 aaKnown RBP18.39■□□□□ 0.53
SRPK1-210ENST00000508473 IZUMO4Q1ZYL8 232 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 SP6Q3SY56 376 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 FAM209BQ5JX69 171 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 GDPD1Q8N9F7 314 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 CCDC71LQ8N9Z2 235 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 OR4A16Q8NH70 328 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 SOSTQ9BQB4 213 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 TMEM14BQ9NUH8 114 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 FKBP11Q9NYL4 201 aa18.39■□□□□ 0.53
SRPK1-210ENST00000508473 GSTZ1O43708 216 aaPredicted RBP18.38■□□□□ 0.53
SRPK1-210ENST00000508473 CTSDP07339 412 aaPredicted RBP18.38■□□□□ 0.53
SRPK1-210ENST00000508473 ARL3P36405 182 aa18.38■□□□□ 0.53
SRPK1-210ENST00000508473 SLC25A24Q6NUK1 477 aa18.38■□□□□ 0.53
SRPK1-210ENST00000508473 HSD17B13Q7Z5P4 300 aaPredicted RBP18.38■□□□□ 0.53
SRPK1-210ENST00000508473 OR5B3Q8NH48 314 aa18.38■□□□□ 0.53
SRPK1-210ENST00000508473 RBM38Q9H0Z9 239 aaKnown RBP18.38■□□□□ 0.53
SRPK1-210ENST00000508473 ZC4H2Q9NQZ6 224 aa18.38■□□□□ 0.53
SRPK1-210ENST00000508473 PEMTQ9UBM1 199 aa18.38■□□□□ 0.53
SRPK1-210ENST00000508473 DNAH9Q9NYC9 4486 aa18.37■□□□□ 0.53
SRPK1-210ENST00000508473 TRIM16LQ309B1 348 aa18.37■□□□□ 0.53
SRPK1-210ENST00000508473 C11orf87Q6NUJ2 197 aa18.37■□□□□ 0.53
SRPK1-210ENST00000508473 CXorf58Q96LI9 332 aa18.37■□□□□ 0.53
SRPK1-210ENST00000508473 ANKRD20A5PA0PJZ0 165 aa18.36■□□□□ 0.53
SRPK1-210ENST00000508473 IGKV1-5P01602 117 aa18.36■□□□□ 0.53
SRPK1-210ENST00000508473 MFAP2P55001 183 aa18.36■□□□□ 0.53
SRPK1-210ENST00000508473 OR51S1Q8NGJ8 323 aa18.36■□□□□ 0.53
SRPK1-210ENST00000508473 TMEM56Q96MV1 263 aa18.36■□□□□ 0.53
SRPK1-210ENST00000508473 THYN1Q9P016 225 aa18.36■□□□□ 0.53
SRPK1-210ENST00000508473 C14orf166Q9Y224 244 aaKnown RBP18.36■□□□□ 0.53
SRPK1-210ENST00000508473 SMAD5-AS1Q9Y6J3 95 aa18.36■□□□□ 0.53
SRPK1-210ENST00000508473 TRBV7-1A0A0A6YYK4 115 aa18.35■□□□□ 0.53
SRPK1-210ENST00000508473 IGHV3-21A0A0B4J1V1 117 aa18.35■□□□□ 0.53
SRPK1-210ENST00000508473 CYB5BO43169 146 aa18.35■□□□□ 0.53
SRPK1-210ENST00000508473 CLEC3BP05452 202 aa18.35■□□□□ 0.53
SRPK1-210ENST00000508473 AKR1C2P52895 323 aa18.35■□□□□ 0.53
SRPK1-210ENST00000508473 ZNF502Q8TBZ5 544 aa18.35■□□□□ 0.53
SRPK1-210ENST00000508473 ASCL2Q99929 193 aa18.35■□□□□ 0.53
SRPK1-210ENST00000508473 RTBDNQ9BSG5 229 aaPredicted RBP18.35■□□□□ 0.53
SRPK1-210ENST00000508473 F11RQ9Y624 299 aaKnown RBP18.35■□□□□ 0.53
SRPK1-210ENST00000508473 EDN2P20800 178 aa18.34■□□□□ 0.53
SRPK1-210ENST00000508473 GPR183P32249 361 aa18.34■□□□□ 0.53
SRPK1-210ENST00000508473 ADAMTSL5Q6ZMM2 481 aa18.34■□□□□ 0.53
SRPK1-210ENST00000508473 PRRT1Q99946 306 aa18.34■□□□□ 0.53
SRPK1-210ENST00000508473 THAP7Q9BT49 309 aaPredicted RBP18.34■□□□□ 0.53
SRPK1-210ENST00000508473 C5orf66Q9H5L9 145 aa18.34■□□□□ 0.53
SRPK1-210ENST00000508473 TEX13DA0A0J9YY54 714 aaPredicted RBP18.33■□□□□ 0.52
SRPK1-210ENST00000508473 PYDC2Q56P42 97 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms