RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 C15orf61A6NNL5 157 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 GNG4P50150 75 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 LOXL3P58215 753 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 MRPL52Q86TS9 123 aaKnown RBP11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 FAM216AQ8WUB2 273 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 HINT2Q9BX68 163 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 JPT1Q9UK76 154 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 PPIAL4AQ9Y536 164 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 TRGV8A0A0C4DH27 118 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 HELTA6NFD8 242 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 DIRC3C9JPN6 131 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 LINC00869P0C866 280 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 PMCHP20382 165 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 PRR20EP86478 221 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 PRR20CP86479 221 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 PRR20DP86480 221 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 PRR20BP86481 221 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 PRR20AP86496 221 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 TMEM136Q6ZRR5 245 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 CNEP1R1Q8N9A8 125 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 LY96Q9Y6Y9 160 aa11.04□□□□□ -0.64
SNCAIP-209ENST00000508017 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 MT-CO2P00403 227 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 GATA2P23769 480 aaPredicted RBP11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 OR4A47Q6IF82 309 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 ZNRF1Q8ND25 227 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 DDB2Q92466 427 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 ZNF503Q96F45 646 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 RBM14Q96PK6 669 aaKnown RBP11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 NRN1Q9NPD7 142 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 LAMTOR5O43504 91 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 CECR9P0C854 216 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 CD46P15529 392 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 AMTP48728 403 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 GAGE1Q13065 139 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 SPRNQ5BIV9 151 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 TRAT1Q6PIZ9 186 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
SNCAIP-209ENST00000508017 NCOR1O75376 2440 aa11.02□□□□□ -0.64
SNCAIP-209ENST00000508017 TRBV9A0A0B4J1U6 114 aa11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 A0A1W2PS18 150 aa11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 C21orf140B9A014 251 aa11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 AREGP15514 252 aa11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 CX3CL1P78423 397 aa11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 MRPL54Q6P161 138 aaKnown RBP11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 Q6ZT83 130 aa11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 OR2Z1Q8NG97 314 aa11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 TRIB1Q96RU8 372 aa11.02□□□□□ -0.65
SNCAIP-209ENST00000508017 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 OR10J4P0C629 311 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 CTRLP40313 264 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 ZNF83P51522 516 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 MMDQ15546 238 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 SPATA45Q537H7 98 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 VWA1Q6PCB0 445 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 NABP2Q9BQ15 211 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 IDI2-AS1Q9NZ38 188 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 TECTAO75443 2155 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 IGKV1OR2-108A0A075B7D4 117 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 PCNX2A6NKB5 2137 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 SRIP30626 198 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 HSPE1P61604 102 aaKnown RBP11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 RAB31Q13636 194 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 FAM214BQ7L5A3 538 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 C1orf174Q8IYL3 243 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 OR4B1Q8NGF8 309 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 OR4S2Q8NH73 311 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 NEUROG1Q92886 237 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 KCNS1Q96KK3 526 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 RNF2Q99496 336 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 TMEM14BQ9NUH8 114 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 CLCF1Q9UBD9 225 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 DSCAMO60469 2012 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 CADP27708 2225 aa11.01□□□□□ -0.65
SNCAIP-209ENST00000508017 CFAP47Q6ZTR5 3102 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 BMPR1BO00238 502 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 CA1P00915 261 aaPredicted RBP11□□□□□ -0.65
SNCAIP-209ENST00000508017 IGLV2-8P01709 118 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 MRPS11P82912 194 aaKnown RBP11□□□□□ -0.65
SNCAIP-209ENST00000508017 MSMPQ1L6U9 139 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 CT45A1Q5HYN5 189 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 FAM19A2Q8N3H0 131 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 NHLRC2Q8NBF2 726 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 CT45A3Q8NHU0 189 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 CALYQ9NYX4 217 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 IL19Q9UHD0 177 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 FOXA2Q9Y261 457 aaPredicted RBP11□□□□□ -0.65
SNCAIP-209ENST00000508017 DSCAML1Q8TD84 2053 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 SAA2-SAA4A0A096LPE2 208 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 F2RL2O00254 374 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 MGST3O14880 152 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 OR7C2O60412 319 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 ZNF253O75346 499 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 SAA2P0DJI9 122 aaPredicted RBP11□□□□□ -0.65
SNCAIP-209ENST00000508017 MGST1P10620 155 aaKnown RBP11□□□□□ -0.65
SNCAIP-209ENST00000508017 HOXC12P31275 282 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 MLANAQ16655 118 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms