RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 DAZ1Q9NQZ3 744 aaKnown RBP4.22□□□□□ -1.73
GYPB-208ENST00000507009 PSORS1C1Q9UIG5 152 aa4.22□□□□□ -1.73
GYPB-208ENST00000507009 KCNK7Q9Y2U2 307 aa4.22□□□□□ -1.73
GYPB-208ENST00000507009 RBMX2Q9Y388 322 aaKnown RBP4.22□□□□□ -1.73
GYPB-208ENST00000507009 VPS13DQ5THJ4 4388 aa4.22□□□□□ -1.73
GYPB-208ENST00000507009 IGLV2-18A0A075B6J9 118 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 TRAV3A0A0B4J244 114 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 IGKV1D-13A0A0B4J2D9 117 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 SMIM30A4D0T7 59 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 HRASP01112 189 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 CDK1P06493 297 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 CRYGCP07315 174 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 GNAO1P09471 354 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 IGKV1-13P0DP09 117 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 HIST1H1DP16402 221 aaKnown RBP4.21□□□□□ -1.74
GYPB-208ENST00000507009 HLA-DMBP28068 263 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 MAS1LP35410 378 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 ELLP55199 621 aaPredicted RBP4.21□□□□□ -1.74
GYPB-208ENST00000507009 RPL11P62913 178 aaKnown RBP4.21□□□□□ -1.74
GYPB-208ENST00000507009 SPHARQ15513 63 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 ANKRD39Q53RE8 183 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 LEMD1Q68G75 181 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 LAIR2Q6ISS4 152 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 Q6ZTC4 211 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 C10orf67Q8IYJ2 551 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 PUSL1Q8N0Z8 303 aaKnown RBP4.21□□□□□ -1.74
GYPB-208ENST00000507009 OR10R2Q8NGX6 335 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 SECTM1Q8WVN6 248 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 UFD1Q92890 307 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 CMTM3Q96MX0 182 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 RNF2Q99496 336 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 CHRDL1Q9BU40 450 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 KRTAP4-5Q9BYR2 181 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 ZNF436Q9C0F3 470 aaPredicted RBP4.21□□□□□ -1.74
GYPB-208ENST00000507009 ATG5Q9H1Y0 275 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 C11orf68Q9H3H3 251 aaKnown RBP4.21□□□□□ -1.74
GYPB-208ENST00000507009 THYN1Q9P016 225 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 RAB22AQ9UL26 194 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 OR2W1Q9Y3N9 320 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 V9GY05 133 aa4.21□□□□□ -1.74
GYPB-208ENST00000507009 TRAV10A0A0B4J240 114 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 IGHV4-28A0A0C4DH34 117 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 IGHV3-66A0A0C4DH42 116 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 IGLC7A0M8Q6 106 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 DNASE2O00115 360 aaPredicted RBP4.2□□□□□ -1.74
GYPB-208ENST00000507009 SULT1C2O00338 296 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 MFNGO00587 321 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 CYB5BO43169 146 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 MRPS14O60783 128 aaKnown RBP4.2□□□□□ -1.74
GYPB-208ENST00000507009 ARL6IP5O75915 188 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 IGHV3-48P01763 117 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 FCER2P06734 321 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 OR13C7P0DN81 318 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 CD37P11049 281 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 PTHLHP12272 177 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 PTBP1P26599 531 aaKnown RBP eCLIP4.2□□□□□ -1.74
GYPB-208ENST00000507009 TCTAP57738 103 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 OR10A3P58181 314 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 LINC00310P59036 64 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 OR2B8PP59922 312 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 TIMM50Q3ZCQ8 353 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 CDNFQ49AH0 187 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 TMEM91Q6ZNR0 172 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 NR2C2APQ86WQ0 139 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 SPAG16Q8N0X2 631 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 TMEM116Q8NCL8 245 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 DMBX1Q8NFW5 382 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 NUDCD2Q8WVJ2 157 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 HSD17B10Q99714 261 aaKnown RBP4.2□□□□□ -1.74
GYPB-208ENST00000507009 RHPN1-AS1Q9BWJ2 59 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 COMMD5Q9GZQ3 224 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 CCDC90BQ9GZT6 254 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 CLEC5AQ9NY25 188 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 C21orf62Q9NYP8 219 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 PRR13Q9NZ81 148 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 DNAH6Q9C0G6 4158 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 MUC4Q99102 2169 aa4.2□□□□□ -1.74
GYPB-208ENST00000507009 METTL21EPA6NDL7 271 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 C11orf94C9JXX5 98 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 NDUFA4O00483 81 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 CHEK1O14757 476 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 RTL8CO15255 209 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 NUPL2O15504 423 aaKnown RBP4.19□□□□□ -1.74
GYPB-208ENST00000507009 ST8SIA3O43173 380 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 SLC22A5O76082 557 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 IGLV2-14P01704 120 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 HLA-DQB1P01920 261 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 EIF4EP06730 217 aaKnown RBP4.19□□□□□ -1.74
GYPB-208ENST00000507009 RBMY1A1P0DJD3 496 aaKnown RBP4.19□□□□□ -1.74
GYPB-208ENST00000507009 RBMY1CP0DJD4 496 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 CMC4P56277 68 aaPredicted RBP4.19□□□□□ -1.74
GYPB-208ENST00000507009 BRWD1-AS2P59051 145 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 FXYD4P59646 89 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 DEFB131AP59861 70 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 ARPC4P59998 168 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 PAFAH1B2P68402 229 aa4.19□□□□□ -1.74
GYPB-208ENST00000507009 FABP5Q01469 135 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms