RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MAPK14Q16539 360 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 ZNF404Q494X3 552 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 MRPL2Q5T653 305 aaKnown RBP3.25□□□□□ -1.89
HERC4-213ENST00000506515 FAM27BQ5VT28 67 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 C8orf74Q6P047 294 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 BRD3OSQ6XYD6 125 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 SLC35D2Q76EJ3 337 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 OR2Z1Q8NG97 314 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 OR51D1Q8NGF3 324 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 OR4A15Q8NGL6 344 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 MUC7Q8TAX7 377 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 SLC25A40Q8TBP6 338 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 WDR55Q9H6Y2 383 aaPredicted RBP3.25□□□□□ -1.89
HERC4-213ENST00000506515 TMEM216Q9P0N5 145 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 A0A1W2PPV4 95 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 C5orf58C9J3I9 102 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 PSPHP1O15172 72 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 UPK1BO75841 260 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 CPSF4O95639 269 aaKnown RBP3.24□□□□□ -1.89
HERC4-213ENST00000506515 IGLV2-8P01709 118 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 LINC00032P0C843 101 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 S100A3P33764 101 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 AQP5P55064 265 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 SNCBQ16143 134 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 KRTAP13-2Q52LG2 175 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 KLHL12Q53G59 568 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 PABPC1L2AQ5JQF8 200 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 FAM222AQ5U5X8 452 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 ZCCHC23Q6ZST2 131 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 SLC36A1Q7Z2H8 476 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 CALHM3Q86XJ0 350 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 SLC35F6Q8N357 371 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 OR8G5Q8NG78 346 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 OR51L1Q8NGJ5 315 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 OR5J2Q8NH18 312 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 TESCQ96BS2 214 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 Q96MT0 163 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 GPR82Q96P67 336 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 OR2V2Q96R30 315 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 CHID1Q9BWS9 393 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 OR2J1Q9GZK6 312 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 NDEL1Q9GZM8 345 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 ARV1Q9H2C2 271 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 TAS2R5Q9NYW4 299 aa3.24□□□□□ -1.89
HERC4-213ENST00000506515 RPUSD1Q9UJJ7 312 aaKnown RBP3.24□□□□□ -1.89
HERC4-213ENST00000506515 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
HERC4-213ENST00000506515 LCE6AA0A183 80 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 K7EIL1 84 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 HMGN4O00479 90 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 PLPP3O14495 311 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 MYL12BO14950 172 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 NDUFB3O43676 98 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 GMDSO60547 372 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 IL6P05231 212 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 CST2P09228 141 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 CELP19835 753 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 RPS4Y1P22090 263 aaKnown RBP3.23□□□□□ -1.89
HERC4-213ENST00000506515 TAS2R43P59537 309 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 GNG11P61952 73 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 ARF6P62330 175 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 FUT5Q11128 374 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 BNIP2Q12982 314 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 CASP8Q14790 479 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 TNFAIP8L2Q6P589 184 aaPredicted RBP3.23□□□□□ -1.89
HERC4-213ENST00000506515 TTC33Q6PID6 262 aaPredicted RBP3.23□□□□□ -1.89
HERC4-213ENST00000506515 TRMT10CQ7L0Y3 403 aaKnown RBP3.23□□□□□ -1.89
HERC4-213ENST00000506515 ST20-AS1Q8NBB2 130 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 OR5AK3PQ8NH89 298 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 OR1S1Q8NH92 325 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 CLHC1Q8NHS4 586 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 CMBLQ96DG6 245 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 TSPAN32Q96QS1 320 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 SLC38A1Q9H2H9 487 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 OR51B6Q9H340 312 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 METTL8Q9H825 291 aaKnown RBP3.23□□□□□ -1.89
HERC4-213ENST00000506515 BCL2L10Q9HD36 194 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 KAAG1Q9UBP8 84 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 ZNF229Q9UJW7 825 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 DNAJC15Q9Y5T4 150 aa3.23□□□□□ -1.89
HERC4-213ENST00000506515 TANC2Q9HCD6 1990 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 MDFIC2A0A1B0GVS7 189 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 TCRBV4S1A1TA0A5B7 111 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 OR6C6A6NF89 314 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 CLDN24A6NM45 220 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 M0R1W7 72 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 COPEO14579 308 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 RFXANKO14593 260 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 NPFFO15130 113 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 CCDC22O60826 627 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 SCO1O75880 301 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 IGF2P01344 180 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 CD5P06127 495 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 MMP7P09237 267 aaPredicted RBP3.22□□□□□ -1.89
HERC4-213ENST00000506515 CD28P10747 220 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 CCL2P13500 99 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 PPIBP23284 216 aaKnown RBP3.22□□□□□ -1.89
HERC4-213ENST00000506515 INSL3P51460 131 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 FOXA1P55317 472 aa3.22□□□□□ -1.89
HERC4-213ENST00000506515 GLO1Q04760 184 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms