RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 AKR1C1Q04828 323 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 HIST2H2BEQ16778 126 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 RPL22L1Q6P5R6 122 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 Q6Q795 121 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 C12orf45Q8N5I9 185 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 ZNF709Q8N972 641 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 CNEP1R1Q8N9A8 125 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 HIST1H2BHQ93079 126 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 C2orf50Q96LR7 162 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 HIST1H2BNQ99877 126 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 HIST1H2BMQ99879 126 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 PBDC1Q9BVG4 233 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 DUSP21Q9H596 190 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 ASF1BQ9NVP2 202 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 SS18L2Q9UHA2 77 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 MCTS1Q9ULC4 181 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 SSR3Q9UNL2 185 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 FUT9Q9Y231 359 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 ATG2BQ96BY7 2078 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 SLIT3O75094 1523 aa2.36□□□□□ -2.03
SMARCAD1-205ENST00000506089 DOCK6Q96HP0 2047 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 SIPA1L1O43166 1804 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 ZCCHC11Q5TAX3 1644 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 IGHV3-73A0A0B4J1V6 119 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 COLCA2A8K830 154 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 MFSD11O43934 449 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 CDS2O95674 445 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 NPYP01303 97 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 G6PCP35575 357 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 HIST1H4AP62805 103 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 EBI3Q14213 229 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 EIF4E3Q8N5X7 224 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 OR10P1Q8NGE3 313 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 OR10K1Q8NGX5 313 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 SLC25A40Q8TBP6 338 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 MALSU1Q96EH3 234 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 ZNF285Q96NJ3 590 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 CHST6Q9GZX3 395 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 COL18A1P39060 1754 aa2.35□□□□□ -2.03
SMARCAD1-205ENST00000506089 FMN1Q68DA7 1419 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 SCN10AQ9Y5Y9 1956 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 IGLV2-18A0A075B6J9 118 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 TRAV4A0A0B4J268 109 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 A0A1B0GU33 70 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 TMEM269A0A1B0GVZ9 245 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 SIGLEC16A6NMB1 481 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 GGTLC3B5MD39 225 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 IFNA14P01570 189 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 PRM2P04554 102 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 SMIM17P0DL12 118 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 GNG5P63218 68 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 S100A12P80511 92 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 ZNF117Q03924 483 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 HTR4Q13639 388 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 SCGB2B2Q4G0G5 96 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 TMEM78Q5T7P6 136 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 TMEM136Q6ZRR5 245 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 HMGN2P46Q86SG4 172 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 PACRGLQ8N7B6 248 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 C12orf29Q8N999 325 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 Q8NAQ8 132 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 CLDND2Q8NHS1 167 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 SKA2Q8WVK7 121 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 IGF2BP2-AS1Q96M15 143 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 SERPINI1Q99574 410 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 MIEN1Q9BRT3 115 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 IL36BQ9NZH7 164 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 CYSLTR1Q9Y271 337 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 HEY1Q9Y5J3 304 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 REREQ9P2R6 1566 aa2.34□□□□□ -2.03
SMARCAD1-205ENST00000506089 HECW1Q76N89 1606 aa2.34□□□□□ -2.04
SMARCAD1-205ENST00000506089 TRPM3Q9HCF6 1732 aaPredicted RBP2.34□□□□□ -2.04
SMARCAD1-205ENST00000506089 CACNA1SQ13698 1873 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 TRAV38-1A0A0B4J264 116 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 LOC102725191A0A1B0GVB3 256 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 FUOMA2VDF0 154 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 MAP1LC3B2A6NCE7 125 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 C19orf71A6NCJ1 209 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 PSCAO43653 123 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 ORC5O43913 435 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 OR2J2O76002 312 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 IGKV1-5P01602 117 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 APOA2P02652 100 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 C1QAP02745 245 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 RPS4Y1P22090 263 aaKnown RBP2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 S100GP29377 79 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 CD200P41217 278 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 ATP5G3P48201 142 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 RHEBQ15382 184 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 LYRM7Q5U5X0 104 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 AADACL3Q5VUY0 350 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 DCUN1D2Q6PH85 259 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 FAM24BQ8N5W8 94 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 H1FXQ92522 213 aaKnown RBP2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 LINC00167Q96N53 147 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 LYSMD1Q96S90 227 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 AIF1LQ9BQI0 150 aa2.33□□□□□ -2.04
SMARCAD1-205ENST00000506089 IMUPQ9GZP8 106 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms