RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NAPSAO96009 420 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 CA2P00918 260 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 IGLV2-23P01705 113 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 MT-ND4P03905 459 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 GSTP1P09211 210 aaKnown RBP2.27□□□□□ -2.05
TCOF1-208ENST00000506063 GNB3P16520 340 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 RCC1P18754 421 aaPredicted RBP2.27□□□□□ -2.05
TCOF1-208ENST00000506063 DTYMKP23919 212 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 CD40LGP29965 261 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 SDC2P34741 201 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 CBX5P45973 191 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 TAS2R46P59540 309 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 ERVFC1-1P60608 527 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 HERV-K104P61576 105 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 CATR1Q13166 79 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 EXOSC2Q13868 293 aaKnown RBP2.27□□□□□ -2.05
TCOF1-208ENST00000506063 GNMTQ14749 295 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 USF2Q15853 346 aaPredicted RBP2.27□□□□□ -2.05
TCOF1-208ENST00000506063 TTC32Q5I0X7 151 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 TMEM69Q5SWH9 247 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 IDNKQ5T6J7 187 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 SIGIRRQ6IA17 410 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 TMEM91Q6ZNR0 172 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 KCTD9Q7L273 389 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 GPR141Q7Z602 305 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 PDPNQ86YL7 162 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 SLC38A6Q8IZM9 456 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 GAPTQ8N292 157 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.27□□□□□ -2.05
TCOF1-208ENST00000506063 ADAD2Q8NCV1 583 aaKnown RBP2.27□□□□□ -2.05
TCOF1-208ENST00000506063 OR10R2Q8NGX6 335 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 NUDCD2Q8WVJ2 157 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 BORCS5Q969J3 196 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 ADTRPQ96IZ2 230 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 HARBI1Q96MB7 349 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 YPEL2Q96QA6 119 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 TSNAXQ99598 290 aaKnown RBP2.27□□□□□ -2.05
TCOF1-208ENST00000506063 HDHD3Q9BSH5 251 aaPredicted RBP2.27□□□□□ -2.05
TCOF1-208ENST00000506063 CABLES2Q9BTV7 478 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 PECRQ9BY49 303 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 OR51E2Q9H255 320 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 IFI27L2Q9H2X8 130 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 AKIP1Q9NQ31 210 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 DIABLOQ9NR28 239 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF586Q9NXT0 402 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF581Q9P0T4 197 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 WASHC3Q9Y3C0 194 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 TNFRSF18Q9Y5U5 241 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 A0A0A6YYD4 124 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 SMIM31A0A1B0GVY4 71 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 CCDC160A6NGH7 325 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 FAM25AB3EWG3 89 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 FAM25CB3EWG5 89 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 FAM25GB3EWG6 89 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 TRDCB7Z8K6 153 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 M0R1X1 148 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 ITGB1BP1O14713 200 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 MPPED1O15442 326 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 SOCS1O15524 211 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 SLC22A5O76082 557 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 ACTL6BO94805 426 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 GABARAPO95166 117 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 PRH1P02810 166 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 CTXN2P0C2S0 81 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 RRASP10301 218 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 NPY1RP25929 384 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 MC5RP33032 325 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 ERVK-16P61578 105 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 LSM3P62310 102 aaKnown RBP2.26□□□□□ -2.05
TCOF1-208ENST00000506063 QRFPP83859 136 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 RHOGP84095 191 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 TAGLNQ01995 201 aaKnown RBP2.26□□□□□ -2.05
TCOF1-208ENST00000506063 C2orf76Q3KRA6 126 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 VMA21Q3ZAQ7 101 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 MORN2Q502X0 79 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 RNASE12Q5GAN4 147 aaKnown RBP2.26□□□□□ -2.05
TCOF1-208ENST00000506063 LY6G6FQ5SQ64 297 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 HACD4Q5VWC8 232 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 MZT2AQ6P582 158 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF880Q6PDB4 577 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 RBPMS2Q6ZRY4 209 aaKnown RBP2.26□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF833PQ6ZTB9 187 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 SCXQ7RTU7 201 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 TMEM17Q86X19 198 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 SAMD12Q8N8I0 201 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 OR52L2PQ8NGH6 319 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 OR13F1Q8NGS4 319 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 OR5H2Q8NGV7 314 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 OR4S2Q8NH73 311 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 GRPEL2Q8TAA5 225 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 VSTM2AQ8TAG5 236 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 RAB2BQ8WUD1 216 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 TCTEX1D2Q8WW35 142 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 ACOT12Q8WYK0 555 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 MAFIPQ8WZ33 124 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 FYTTD1Q96QD9 318 aaKnown RBP2.26□□□□□ -2.05
TCOF1-208ENST00000506063 CLCC1Q96S66 551 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 PHB2Q99623 299 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 GFI1Q99684 422 aa2.26□□□□□ -2.05
TCOF1-208ENST00000506063 ATG101Q9BSB4 218 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms