RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 FUT9Q9Y231 359 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 TIMM22Q9Y584 194 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 PXMP4Q9Y6I8 212 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 CUL9Q8IWT3 2517 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 PIK3R4Q99570 1358 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 TNRC6BQ9UPQ9 1833 aaKnown RBP0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 GLI3P10071 1580 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 EIF4G1Q04637 1599 aaKnown RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 C9orf84Q5VXU9 1444 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 GGT3PA6NGU5 568 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 LST1O00453 97 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 CXCR6O00574 342 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 ACOX3O15254 700 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 DEXIO95424 95 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 NSA2O95478 260 aaKnown RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 IGHV3-7P01780 117 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 TFPTP0C1Z6 253 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 FAM228BP0C875 321 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 COX5BP10606 129 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 FGF6P10767 208 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 CCL5P13501 91 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 HLA-DMBP28068 263 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 MARCKSL1P49006 195 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 MAGOHP61326 146 aaKnown RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 TNFAIP6P98066 277 aaPredicted RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 EMX1Q04741 257 aaPredicted RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 RPL18Q07020 188 aaKnown RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 DMTNQ08495 405 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 MLLT11Q13015 90 aaPredicted RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 STX5Q13190 355 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 DEFB115Q30KQ5 88 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 TNFAIP8L3Q5GJ75 292 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 COQ5Q5HYK3 327 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 CLVS2Q5SYC1 327 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 C1orf195Q5TG92 126 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 FAM27BQ5VT28 67 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 FAM173BQ6P4H8 233 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 ZNF550Q7Z398 422 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 DHFR2Q86XF0 187 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 LINC00471Q8N535 108 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 OR1M1Q8NGA1 313 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 SERPINI1Q99574 410 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 MRPS26Q9BYN8 205 aaKnown RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 YIPF3Q9GZM5 350 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 PAQR5Q9NXK6 330 aaPredicted RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 OR5AC2Q9NZP5 309 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 COQ4Q9Y3A0 265 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 LSM5Q9Y4Y9 91 aaKnown RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 ATP6V1DQ9Y5K8 247 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 SNURFQ9Y675 71 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 DIDO1Q9BTC0 2240 aaKnown RBP0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 TECTAO75443 2155 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 RP1P56715 2156 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 ALPK2Q86TB3 2170 aa0.42□□□□□ -2.34
HMGB1P29-201ENST00000505659 EML6Q6ZMW3 1958 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 DCCP43146 1447 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 FABP5P3A8MUU1 101 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 H0Y980 276 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 DCTN3O75935 186 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 PMP2P02689 132 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 PRM2P04554 102 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 ISG15P05161 165 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 REG1AP05451 166 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 KRT7P08729 469 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 DEFA4P12838 97 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 CCL1P22362 96 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 MAP2K4P45985 399 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 EIF2B2P49770 351 aaKnown RBP0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 RAB5BP61020 215 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 NAA20P61599 178 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 IFITM2Q01629 132 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 SURF2Q15527 256 aaPredicted RBP0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 GRK1Q15835 563 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 IBA57Q5T440 356 aaKnown RBP0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 CD200R1LQ6Q8B3 271 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 AAED1Q7RTV5 226 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 GID4Q8IVV7 300 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 IQCF2Q8IXL9 164 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 DEFB125Q8N687 156 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 C11orf40Q8WZ69 217 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 RAB8BQ92930 207 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 OPTNQ96CV9 577 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 CNBD2Q96M20 576 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 MRPL57Q9BQC6 102 aaKnown RBP0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 COMMD5Q9GZQ3 224 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 EFCAB1Q9HAE3 211 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 IL36BQ9NZH7 164 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 MAP3K5Q99683 1374 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 CACNA1BQ00975 2339 aa0.41□□□□□ -2.34
HMGB1P29-201ENST00000505659 EVC2Q86UK5 1308 aa0.4□□□□□ -2.34
HMGB1P29-201ENST00000505659 COL4A5P29400 1685 aa0.4□□□□□ -2.34
HMGB1P29-201ENST00000505659 LAMB4A4D0S4 1761 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 TNRC6AQ8NDV7 1962 aaKnown RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 TRBV20OR9-2A0A075B6H5 130 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 TRAV14DV4A0A0A6YYC5 116 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 A0A0J9YY10 115 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 A0A1B0GX78 115 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 SMIM23A6NLE4 172 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 IBA57-AS1B1ANH7 110 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 TRAPPC2LH3BP13 241 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms