RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RAB14P61106 215 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 TMEM258P61165 79 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 AKR1C1Q04828 323 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 SLC38A11Q08AI6 406 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 KCNJ8Q15842 424 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 ACOT6Q3I5F7 207 aaPredicted RBP1.26□□□□□ -2.21
CHD1-203ENST00000505657 PABPC1L2AQ5JQF8 200 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 GLT8D1Q68CQ7 371 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 Q6ZS49 121 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 ACOT12Q8WYK0 555 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 DCUN1D1Q96GG9 259 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 TIMM21Q9BVV7 248 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 OR8D2Q9GZM6 311 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 WDR61Q9GZS3 305 aaKnown RBP1.26□□□□□ -2.21
CHD1-203ENST00000505657 CXCL16Q9H2A7 254 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 EFCAB1Q9HAE3 211 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 PRO2289Q9P1D8 64 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 FUT9Q9Y231 359 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 TIMM9Q9Y5J7 89 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 KIF1BO60333 1816 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 PXDNLA1KZ92 1463 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 CR1P17927 2039 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 FAM236DA0A1B0GTK5 79 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 KPNA3O00505 521 aaPredicted RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 FAAHO00519 579 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 PGLYRP1O75594 196 aaPredicted RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 HLA-DRB1P01911 266 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 FAM236CP0DP71 79 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 HIST1H1TP22492 207 aaPredicted RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 MSNP26038 577 aaKnown RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 AP3S2P59780 193 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 RPS20P60866 119 aaKnown RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 PSME3P61289 254 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 SNRPD2P62316 118 aaKnown RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 POLR2GP62487 172 aaKnown RBP eCLIP1.25□□□□□ -2.21
CHD1-203ENST00000505657 RUNX1Q01196 453 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 FADDQ13158 208 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 SRSF6Q13247 344 aaKnown RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 TPRXLQ17RH7 258 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 ZNF791Q3KP31 576 aaPredicted RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 SPOPLQ6IQ16 392 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 ANKRD29Q8N6D5 301 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 ZNF676Q8N7Q3 588 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 DCANP1Q8TF63 244 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 DGCR14Q96DF8 476 aaKnown RBP1.25□□□□□ -2.21
CHD1-203ENST00000505657 OR52E6Q96RD3 313 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 ULBP3Q9BZM4 244 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 IL36BQ9NZH7 164 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 RP1P56715 2156 aa1.25□□□□□ -2.21
CHD1-203ENST00000505657 RTEL1-TNFRSF6BF6WH68 1400 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 BAZ2BQ9UIF8 2168 aaKnown RBP1.24□□□□□ -2.21
CHD1-203ENST00000505657 ZNF532Q9HCE3 1301 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 IGLV3-9A0A075B6K5 115 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 TRAV7A0A075B6U4 112 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 OR4C46A6NHA9 309 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 H7C2G1 150 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 CNIH1O95406 144 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 PSMB8P28062 276 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 ALDH3A1P30838 453 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 EIF2B2P49770 351 aaKnown RBP1.24□□□□□ -2.21
CHD1-203ENST00000505657 IDH3GP51553 393 aaPredicted RBP1.24□□□□□ -2.21
CHD1-203ENST00000505657 MRPS15P82914 257 aaKnown RBP1.24□□□□□ -2.21
CHD1-203ENST00000505657 C9orf64Q5T6V5 341 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 LPCAT3Q6P1A2 487 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 LYZL1Q6UWQ5 148 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 Q6ZTI0 123 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 KTN1-AS1Q86SY8 53 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 C20orf196Q8IYI0 205 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 LRRC25Q8N386 305 aaPredicted RBP1.24□□□□□ -2.21
CHD1-203ENST00000505657 MRPL30Q8TCC3 161 aaKnown RBP1.24□□□□□ -2.21
CHD1-203ENST00000505657 VCX3BQ9H321 246 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 C11orf68Q9H3H3 251 aaKnown RBP1.24□□□□□ -2.21
CHD1-203ENST00000505657 PRTFDC1Q9NRG1 225 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 TP73-AS1Q9UF72 201 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 SLC22A13Q9Y226 551 aa1.24□□□□□ -2.21
CHD1-203ENST00000505657 PRRC2BQ5JSZ5 2229 aaKnown RBP1.24□□□□□ -2.21
CHD1-203ENST00000505657 CCDC144AA2RUR9 1427 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 ANAPC1Q9H1A4 1944 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 MYH2Q9UKX2 1941 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 IGHV3-64A0A075B6Q5 118 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 A0A087WUJ7 227 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 IGKV1D-43A0A0B4J1Z2 117 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 IGHV1-18A0A0C4DH31 117 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 PQLC2LA1A4F0 135 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 TMEM210A6NLX4 147 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 HMSDA8MTL9 139 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 NOS1APO75052 506 aaPredicted RBP1.23□□□□□ -2.21
CHD1-203ENST00000505657 ATP5HO75947 161 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 CRYZL1O95825 349 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 IGHV3-7P01780 117 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 PRM2P04554 102 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 IFNA6P05013 189 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 SERPINA7P05543 415 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 CTXN2P0C2S0 81 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 SULT1A3P0DMM9 295 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 SULT1A4P0DMN0 295 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 EVX1P49640 407 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 AQP4P55087 323 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 HBA1P69905 142 aa1.23□□□□□ -2.21
CHD1-203ENST00000505657 REEP5Q00765 189 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms