RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 PSG1P11464 419 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 UBE2D1P51668 147 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 RPS11P62280 158 aaKnown RBP eCLIP4.38□□□□□ -1.71
MATR3-211ENST00000505625 FAM216BQ8N7L0 139 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 OR4D5Q8NGN0 318 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 FCRL1Q96LA6 429 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 TXNDC17Q9BRA2 123 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 RSPO3Q9BXY4 272 aaPredicted RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 C20orf27Q9GZN8 174 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 MAP1LC3BQ9GZQ8 125 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 ESM1Q9NQ30 184 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 IL19Q9UHD0 177 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 CACNA1GO43497 2377 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 IGLV3-10A0A075B6K4 115 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 J3QT63 122 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 M0QZK8 103 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SOCS1O15524 211 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SMIM18P0DKX4 95 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 PAX8Q06710 450 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 ZIC1Q15915 447 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SPRR3Q9UBC9 169 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 PILRAQ9UKJ1 303 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 IGKV1D-42A0A075B6H8 117 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 GRIFINA4D1Z8 144 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 C17orf51A8MQB3 221 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 A8MWL6 223 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 LINC01619G3V211 115 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 PTP4A3O75365 173 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 HPRT1P00492 218 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 HIST1H1DP16402 221 aaKnown RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 RCC1P18754 421 aaPredicted RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 SS18Q15532 418 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 GTF3AQ92664 365 aaKnown RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 NEUROG1Q92886 237 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 ZNF646O15015 1829 aaPredicted RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 ANK1P16157 1881 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 KBTBD11-OT1A0A1B0GTJ5 212 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 GCM2O75603 506 aaPredicted RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 CCL3L1P16619 93 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SRSF2Q01130 221 aaKnown RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 MZB1Q8WU39 189 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 PHYHIPLQ96FC7 376 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 REG4Q9BYZ8 158 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 APC2O95996 2303 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 AHCTF1Q8WYP5 2266 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 TRAV41A0A0B4J266 112 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 GAGE12BA1L429 117 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 PAX4O43316 350 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 GAGE7O76087 117 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 TCRBP04435 133 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 GAGE12FP0CL80 117 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 GAGE12GP0CL81 117 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 GAGE12IP0CL82 117 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 FSTP19883 344 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 RAB24Q969Q5 203 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 ST6GALNAC2Q9UJ37 374 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 NRXN2Q9P2S2 1712 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 TRAV24A0A0B4J272 114 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 H3BMM0 161 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 CFDP00746 253 aaPredicted RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 F12P00748 615 aaPredicted RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 CECR9P0C854 216 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 TMEM241Q24JQ0 296 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 VWC2Q2TAL6 325 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 ANKRD39Q53RE8 183 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 TPTE2P1Q5T6R2 138 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 ZNF66Q6ZN08 573 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 LINC00518Q8N0U6 118 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 CLDND2Q8NHS1 167 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 MARC2Q969Z3 335 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 UBE2WQ96B02 151 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 ALG14Q96F25 216 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 PGLYRP3Q96LB9 341 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 TP53RKQ96S44 253 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 PDFQ9HBH1 243 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 F8VVB4 439 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 F8VWA3 439 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 NAPSAO96009 420 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 PSMB6P28072 239 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 RBM11P57052 281 aaKnown RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 ZNF880Q6PDB4 577 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 Q6ZQT7 251 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 LSM10Q969L4 123 aaKnown RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 RAB40CQ96S21 281 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 CNOT2Q9NZN8 540 aaKnown RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 ZNF729A6NN14 1252 aaPredicted RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 K7ERU9 68 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 MGST3O14880 152 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 SCTP09683 121 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 FOXA3P55318 350 aaPredicted RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 CMC4P56277 68 aaPredicted RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 BSXQ3C1V8 233 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 ZNF672Q499Z4 452 aaPredicted RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 ZNF474Q6S9Z5 364 aaPredicted RBP4.37□□□□□ -1.71
MATR3-211ENST00000505625 OR2K2Q8NGT1 345 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 ANGPTL4Q9BY76 406 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 TAL2Q16559 108 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 PRSS54Q6PEW0 395 aa4.37□□□□□ -1.71
MATR3-211ENST00000505625 ZNF257Q9Y2Q1 563 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms