RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 TEPPQ6URK8 271 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 LCN15Q6UWW0 184 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 PNKDQ8N490 385 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 Q8N7P7 452 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 TEX45Q8NA69 505 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 NANPQ8TBE9 248 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 TVP23CQ96ET8 276 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 RARRES2Q99969 163 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 CLEC7AQ9BXN2 247 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 COMMD5Q9GZQ3 224 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 VSIRQ9H7M9 311 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 CHODLQ9H9P2 273 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 SIRT7Q9NRC8 400 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 NDUFA4L2Q9NRX3 87 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 GNG13Q9P2W3 67 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 SPENQ96T58 3664 aaKnown RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 SETXQ7Z333 2677 aaKnown RBP7.96□□□□□ -1.13
COL1A1-210ENST00000504289 ABCA4P78363 2273 aa7.96□□□□□ -1.13
COL1A1-210ENST00000504289 IGHV2-26A0A0B4J1V2 119 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 PPIAL4CA0A0B4J2A2 164 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 SRRM4A7MD48 611 aaKnown RBP7.96□□□□□ -1.14
COL1A1-210ENST00000504289 H3BQ15 152 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 CA2P00918 260 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 MT-ND4LP03901 98 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 PPIAL4GP0DN37 164 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 OR13C7P0DN81 318 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 ATF4P18848 351 aaPredicted RBP7.96□□□□□ -1.14
COL1A1-210ENST00000504289 CDC34P49427 236 aaPredicted RBP7.96□□□□□ -1.14
COL1A1-210ENST00000504289 ELLP55199 621 aaPredicted RBP7.96□□□□□ -1.14
COL1A1-210ENST00000504289 TMEM144Q7Z5S9 345 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 KIR3DL3Q8N743 410 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 RNASEH2CQ8TDP1 164 aaKnown RBP7.96□□□□□ -1.14
COL1A1-210ENST00000504289 RXFP4Q8TDU9 374 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 TMEM170AQ8WVE7 144 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 RAB24Q969Q5 203 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 SLC35E1Q96K37 410 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 PATZ1Q9HBE1 687 aaKnown RBP7.96□□□□□ -1.14
COL1A1-210ENST00000504289 TMEM242Q9NWH2 141 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 ARL2-SNX15V9GYD0 113 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 IGSF10Q6WRI0 2623 aa7.96□□□□□ -1.14
COL1A1-210ENST00000504289 HELZ2Q9BYK8 2649 aaKnown RBP7.95□□□□□ -1.14
COL1A1-210ENST00000504289 A0A1W2PPV4 95 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 M0R036 132 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 NUPL2O15504 423 aaKnown RBP7.95□□□□□ -1.14
COL1A1-210ENST00000504289 F12P00748 615 aaPredicted RBP7.95□□□□□ -1.14
COL1A1-210ENST00000504289 IGKV1D-33P01593 117 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 IGKV1-33P01594 117 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 RPS16P62249 146 aaKnown RBP7.95□□□□□ -1.14
COL1A1-210ENST00000504289 MEF2BQ02080 365 aaPredicted RBP7.95□□□□□ -1.14
COL1A1-210ENST00000504289 PAX2Q02962 417 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 SPINK9Q5DT21 86 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 CBLN2Q8IUK8 224 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 MMD2Q8IY49 270 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 CYB561D1Q8N8Q1 229 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 SRSF8Q9BRL6 282 aaKnown RBP7.95□□□□□ -1.14
COL1A1-210ENST00000504289 GGTLC1Q9BX51 225 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 RPS10P5Q9NQ39 176 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 MALRD1Q5VYJ5 2156 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 NBEAQ8NFP9 2946 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 FLNBO75369 2602 aaKnown RBP7.95□□□□□ -1.14
COL1A1-210ENST00000504289 GCN1Q92616 2671 aaKnown RBP7.95□□□□□ -1.14
COL1A1-210ENST00000504289 NBASA2RRP1 2371 aa7.95□□□□□ -1.14
COL1A1-210ENST00000504289 ADGRG4Q8IZF6 3080 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 A0A1B0GV50 99 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 ZFP92A6NM28 416 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 COLCA2A8K830 154 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 OOSP1A8MZH6 123 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 BUB1B-PAK6H3BSN5 160 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 PDE6DO43924 150 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 MT-CO2P00403 227 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 IGLV2-23P01705 113 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 SNRNP70P08621 437 aaKnown RBP7.94□□□□□ -1.14
COL1A1-210ENST00000504289 RNASE2P10153 161 aaKnown RBP7.94□□□□□ -1.14
COL1A1-210ENST00000504289 CEACAM3P40198 252 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 RHOBP62745 196 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 PRR20EP86478 221 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 PRR20CP86479 221 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 PRR20DP86480 221 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 PRR20BP86481 221 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 PRR20AP86496 221 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 LY6DQ14210 128 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 HNF4GQ14541 408 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 CDSNQ15517 529 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 AVPI1Q5T686 147 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 FAM90A2PQ658T7 463 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 PVRIGQ6DKI7 326 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 TMEM88Q6PEY1 159 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 ZNF114Q8NC26 417 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 OR11H6Q8NGC7 330 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 ITLN2Q8WWU7 325 aaPredicted RBP7.94□□□□□ -1.14
COL1A1-210ENST00000504289 MALSU1Q96EH3 234 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 RNF2Q99496 336 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 MGST2Q99735 147 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 CTDSP1Q9GZU7 261 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 PXMP4Q9Y6I8 212 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 TET2Q6N021 2002 aaPredicted RBP7.94□□□□□ -1.14
COL1A1-210ENST00000504289 TNCP24821 2201 aa7.94□□□□□ -1.14
COL1A1-210ENST00000504289 ITPR1Q14643 2758 aa7.93□□□□□ -1.14
COL1A1-210ENST00000504289 HIVEP3Q5T1R4 2406 aa7.93□□□□□ -1.14
COL1A1-210ENST00000504289 A6NNC1 897 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms