RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 GCHFRP30047 84 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 PDZD11Q5EBL8 140 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 GFRALQ6UXV0 394 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 ZNF714Q96N38 554 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 TMEM204Q9BSN7 226 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 SAP30LQ9HAJ7 183 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 JKAMPQ9P055 326 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 PPIAL4EA0A075B759 164 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PPIAL4DF5H284 164 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PPIAL4FP0DN26 164 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 CHRNA7P36544 502 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PRR20EP86478 221 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PRR20CP86479 221 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PRR20DP86480 221 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PRR20BP86481 221 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PRR20AP86496 221 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 OR5B3Q8NH48 314 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 OSR1Q8TAX0 266 aaPredicted RBP13.53□□□□□ -0.24
VCAN-204ENST00000502527 DERL1Q9BUN8 251 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 SEPSECSQ9HD40 501 aaKnown RBP13.53□□□□□ -0.24
VCAN-204ENST00000502527 ZNRD1Q9P1U0 126 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PPIAL4AQ9Y536 164 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 TET2Q6N021 2002 aaPredicted RBP13.53□□□□□ -0.24
VCAN-204ENST00000502527 RAI1Q7Z5J4 1906 aaPredicted RBP13.53□□□□□ -0.24
VCAN-204ENST00000502527 TANC2Q9HCD6 1990 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 PLCE1Q9P212 2302 aa13.53□□□□□ -0.24
VCAN-204ENST00000502527 TEX50A0A1B0GTY4 177 aa13.52□□□□□ -0.24
VCAN-204ENST00000502527 APOA2P02652 100 aa13.52□□□□□ -0.24
VCAN-204ENST00000502527 TYMSP04818 313 aa13.52□□□□□ -0.24
VCAN-204ENST00000502527 IGFBP2P18065 325 aa13.52□□□□□ -0.24
VCAN-204ENST00000502527 ZCCHC24Q8N2G6 241 aaKnown RBP13.52□□□□□ -0.24
VCAN-204ENST00000502527 BTF3L4Q96K17 158 aa13.52□□□□□ -0.24
VCAN-204ENST00000502527 RP1L1Q8IWN7 2480 aaPredicted RBP13.52□□□□□ -0.24
VCAN-204ENST00000502527 DYSFO75923 2080 aa13.52□□□□□ -0.25
VCAN-204ENST00000502527 TMEM178BH3BS89 294 aa13.52□□□□□ -0.25
VCAN-204ENST00000502527 SAA1P0DJI8 122 aaPredicted RBP13.52□□□□□ -0.25
VCAN-204ENST00000502527 LCN2P80188 198 aa13.52□□□□□ -0.25
VCAN-204ENST00000502527 C2orf83Q53S99 150 aa13.52□□□□□ -0.25
VCAN-204ENST00000502527 TMEM144Q7Z5S9 345 aa13.52□□□□□ -0.25
VCAN-204ENST00000502527 RND1Q92730 232 aa13.52□□□□□ -0.25
VCAN-204ENST00000502527 IMMP2LQ96T52 175 aa13.52□□□□□ -0.25
VCAN-204ENST00000502527 MRPL20Q9BYC9 149 aaKnown RBP13.52□□□□□ -0.25
VCAN-204ENST00000502527 SH3BGRL2Q9UJC5 107 aa13.52□□□□□ -0.25
VCAN-204ENST00000502527 IGHV2-70P01814 119 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 FABP4P15090 132 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 CLEC12BQ2HXU8 276 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 SPATA31B1PQ5VZV4 182 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 TMEM200BQ69YZ2 307 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 TMEM183AQ8IXX5 376 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 Q8NA96 180 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 LRFN3Q9BTN0 628 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 SLC45A2Q9UMX9 530 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 YTHDF2Q9Y5A9 579 aaKnown RBP13.51□□□□□ -0.25
VCAN-204ENST00000502527 DMRT1Q9Y5R6 373 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 LINC00869P0C866 280 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 CCL3L1P16619 93 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 CHODLQ9H9P2 273 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 ZNF835Q9Y2P0 537 aa13.51□□□□□ -0.25
VCAN-204ENST00000502527 ICE1Q9Y2F5 2266 aa13.5□□□□□ -0.25
VCAN-204ENST00000502527 SCO2A0A1W2PP80 73 aa13.5□□□□□ -0.25
VCAN-204ENST00000502527 OR4P4Q8NGL7 312 aa13.5□□□□□ -0.25
VCAN-204ENST00000502527 OR1L8Q8NGR8 309 aa13.5□□□□□ -0.25
VCAN-204ENST00000502527 CCL17Q92583 94 aa13.5□□□□□ -0.25
VCAN-204ENST00000502527 SFRP2Q96HF1 295 aa13.5□□□□□ -0.25
VCAN-204ENST00000502527 SLC35E1Q96K37 410 aa13.5□□□□□ -0.25
VCAN-204ENST00000502527 HARBI1Q96MB7 349 aa13.5□□□□□ -0.25
VCAN-204ENST00000502527 AURKAIP1Q9NWT8 199 aaPredicted RBP13.5□□□□□ -0.25
VCAN-204ENST00000502527 ZFHX2Q9C0A1 2572 aaPredicted RBP13.5□□□□□ -0.25
VCAN-204ENST00000502527 MDFIC2A0A1B0GVS7 189 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 H0YJW9 148 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 NDUFB3O43676 98 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 C1QTNF9P0C862 333 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 LRRC10Q5BKY1 277 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 ACTL10Q5JWF8 245 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 FAM78BQ5VT40 261 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 ZNF114Q8NC26 417 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 OR5AN1Q8NGI8 311 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 ACY3Q96HD9 319 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 UHRF2Q96PU4 802 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 COMMD5Q9GZQ3 224 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 NGBQ9NPG2 151 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 TMEM106BQ9NUM4 274 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 RIF1Q5UIP0 2472 aaKnown RBP13.49□□□□□ -0.25
VCAN-204ENST00000502527 AKAP13Q12802 2813 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 FOXH1O75593 365 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 FOXL1Q12952 345 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 TMEM177Q53S58 311 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 COA6Q5JTJ3 125 aaKnown RBP13.49□□□□□ -0.25
VCAN-204ENST00000502527 DNLZQ5SXM8 178 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 ASCL5Q7RTU5 278 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 OR1P1Q8NH06 330 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 H1FXQ92522 213 aaKnown RBP13.49□□□□□ -0.25
VCAN-204ENST00000502527 FLYWCH2Q96CP2 140 aaKnown RBP13.49□□□□□ -0.25
VCAN-204ENST00000502527 PACRGQ96M98 296 aaPredicted RBP13.49□□□□□ -0.25
VCAN-204ENST00000502527 PFDN5Q99471 154 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 FUT9Q9Y231 359 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 ARL2-SNX15V9GYD0 113 aa13.49□□□□□ -0.25
VCAN-204ENST00000502527 MGAQ8IWI9 3026 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 TRBV20OR9-2A0A075B6H5 130 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms