RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 NECAP1Q8NC96 275 aa12.16□□□□□ -0.46
VIM-208ENST00000497849 OR4A4PQ8NGN8 299 aa12.16□□□□□ -0.46
VIM-208ENST00000497849 SRSF12Q8WXF0 261 aaKnown RBP12.16□□□□□ -0.46
VIM-208ENST00000497849 TRIM63Q969Q1 353 aa12.16□□□□□ -0.46
VIM-208ENST00000497849 HARBI1Q96MB7 349 aa12.16□□□□□ -0.46
VIM-208ENST00000497849 KLK11Q9UBX7 282 aa12.16□□□□□ -0.46
VIM-208ENST00000497849 ANXA10Q9UJ72 324 aa12.16□□□□□ -0.46
VIM-208ENST00000497849 APLNQ9ULZ1 77 aa12.16□□□□□ -0.46
VIM-208ENST00000497849 KIR2DL5BA0A0G2JN68 375 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 KIR2DL5BA0A0G2JPC4 375 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 A8MWP6 167 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 M0R1X1 148 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 OR2J3O76001 311 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 PMP2P02689 132 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 HLA-DMAP28067 261 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 CBX5P45973 191 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 SSBP1Q04837 148 aaKnown RBP12.15□□□□□ -0.46
VIM-208ENST00000497849 TNXAQ16473 311 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 KIR2DL5AQ8N109 375 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 STPG3Q8N7X2 389 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 KIR2DL5BQ8NHK3 375 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 CABLES2Q9BTV7 478 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 MTFP1Q9UDX5 166 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 FBXL17Q9UF56 701 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 UBQLN2Q9UHD9 624 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 ZNF221Q9UK13 617 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 ANAPC10Q9UM13 185 aa12.15□□□□□ -0.46
VIM-208ENST00000497849 RBMX2Q9Y388 322 aaKnown RBP12.15□□□□□ -0.46
VIM-208ENST00000497849 TRBV6-7A0A0A0MS04 114 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 LINC00854A0A1B0GVQ3 168 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 MPPED1O15442 326 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 NAT1P18440 290 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 NFYAP23511 347 aaPredicted RBP12.14□□□□□ -0.47
VIM-208ENST00000497849 TCTAP57738 103 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 AP3S2P59780 193 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 ARPC4P59998 168 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
VIM-208ENST00000497849 PRSS8Q16651 343 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 RGS21Q2M5E4 152 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 TMEM177Q53S58 311 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 TOMM5Q8N4H5 51 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 OR1L6Q8NGR2 347 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 C11orf45Q8TAV5 145 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 RDH8Q9NYR8 311 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 HERC1Q15751 4861 aa12.14□□□□□ -0.47
VIM-208ENST00000497849 TRAV25A0A0B4J276 109 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 ZNF320A2RRD8 509 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 SHOXO15266 292 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 IFNA4P05014 189 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 FCGR2BP31994 310 aaPredicted RBP12.13□□□□□ -0.47
VIM-208ENST00000497849 RFX2P48378 723 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 ASAH1Q13510 395 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 FAM209BQ5JX69 171 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 OR10J5Q8NHC4 309 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 CCDC140Q96MF4 163 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 GINS4Q9BRT9 223 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 TAS2R8Q9NYW2 309 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 TBC1D24Q9ULP9 559 aa12.13□□□□□ -0.47
VIM-208ENST00000497849 M0QYG6 137 aa12.12□□□□□ -0.47
VIM-208ENST00000497849 IGHV3-23P01764 117 aa12.12□□□□□ -0.47
VIM-208ENST00000497849 RPL35AP18077 110 aaKnown RBP12.12□□□□□ -0.47
VIM-208ENST00000497849 RCVRNP35243 200 aa12.12□□□□□ -0.47
VIM-208ENST00000497849 KLF9Q13886 244 aaPredicted RBP12.12□□□□□ -0.47
VIM-208ENST00000497849 IDO2Q6ZQW0 420 aa12.12□□□□□ -0.47
VIM-208ENST00000497849 H1FOOQ8IZA3 346 aaPredicted RBP12.12□□□□□ -0.47
VIM-208ENST00000497849 TEX45Q8NA69 505 aa12.12□□□□□ -0.47
VIM-208ENST00000497849 OR5AP2Q8NGF4 316 aa12.12□□□□□ -0.47
VIM-208ENST00000497849 MFFQ9GZY8 342 aa12.12□□□□□ -0.47
VIM-208ENST00000497849 FBXL7Q9UJT9 491 aa12.12□□□□□ -0.47
VIM-208ENST00000497849 ANKRD20A5PA0PJZ0 165 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 PRSS29PA6NIE9 313 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 PLA2G10O15496 165 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 S1PR2O95136 353 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 C8orf88P0DMB2 117 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 FCGR2CP31995 323 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 HRH1P35367 487 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 ARL3P36405 182 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 UBE2KP61086 200 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 CDK10Q15131 360 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 ODF3L2Q3SX64 289 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 MZT2BQ6NZ67 158 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 CLEC19AQ6UXS0 136 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 RBPMS2Q6ZRY4 209 aaKnown RBP12.11□□□□□ -0.47
VIM-208ENST00000497849 C19orf35Q6ZS72 473 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.11□□□□□ -0.47
VIM-208ENST00000497849 OR5H2Q8NGV7 314 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
VIM-208ENST00000497849 MAP6D1Q9H9H5 199 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 SDHAF2Q9NX18 166 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 EHFQ9NZC4 300 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 S4R3C0 116 aa12.11□□□□□ -0.47
VIM-208ENST00000497849 IGKV1D-13A0A0B4J2D9 117 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 CENPXA8MT69 81 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 RTL8CO15255 209 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 LYRM1O43325 122 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 PTTG1O95997 202 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms