RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 STPG3Q8N7X2 389 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 POM121L2Q96KW2 1035 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 GUCD1Q96NT3 240 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 HSD17B10Q99714 261 aaKnown RBP10.75□□□□□ -0.69
VEGFA-215ENST00000497139 SRXN1Q9BYN0 137 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 SEC16AO15027 2179 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 FAM231BA6NCW3 169 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 ZNF716A6NP11 495 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 AHRRA9YTQ3 701 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 J3QT63 122 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 COX8AP10176 69 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 BRWD1-AS2P59051 145 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 DPF1Q92782 380 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 SZT2Q5T011 3432 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 A0A1W2PPC4 97 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 A0A1W2PRE2 83 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 hDV102S1A0JD36 115 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 LEPROTL1O95214 131 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 HAND1O96004 215 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 MFAP2P55001 183 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 KIR3DL3Q8N743 410 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 NHLRC2Q8NBF2 726 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 GALMQ96C23 342 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 C19orf24Q9BVV8 132 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 DEFB126Q9BYW3 111 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 FGF21Q9NSA1 209 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 CLEC5AQ9NY25 188 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 CLCF1Q9UBD9 225 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 REV3LO60673 3130 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 DUX1O43812 170 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 SMPD2O60906 423 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 LIPFP07098 398 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 HTR1DP28221 377 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 VDAC2P45880 294 aaPredicted RBP10.74□□□□□ -0.69
VEGFA-215ENST00000497139 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
VEGFA-215ENST00000497139 TMEM97Q5BJF2 176 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 BPIFA4PQ86YQ2 179 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 C5orf30Q96GV9 206 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 PCDH15Q96QU1 1955 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 MAP1LC3CQ9BXW4 147 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 PSG11Q9UQ72 335 aa10.74□□□□□ -0.69
VEGFA-215ENST00000497139 IGHV1OR21-1A0A087WYE8 117 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 ANKRD30BLA7E2S9 258 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 CYC1P08574 325 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 PRR20EP86478 221 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 PRR20CP86479 221 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 PRR20DP86480 221 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 PRR20BP86481 221 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 PRR20AP86496 221 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 ZNF488Q96MN9 340 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 SOX21Q9Y651 276 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-215ENST00000497139 F5P12259 2224 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 TRGV8A0A0C4DH27 118 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 OR2H2O95918 312 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 P04436 131 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 PPIAL4GP0DN37 164 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 MGST1P10620 155 aaKnown RBP10.73□□□□□ -0.69
VEGFA-215ENST00000497139 WFDC8Q8IUA0 241 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 OR1N2Q8NGR9 330 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 H1FXQ92522 213 aaKnown RBP10.73□□□□□ -0.69
VEGFA-215ENST00000497139 HEYLQ9NQ87 328 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-215ENST00000497139 ABI3Q9P2A4 366 aa10.73□□□□□ -0.69
VEGFA-215ENST00000497139 A0A087X0K7 114 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 IGHV1-24A0A0C4DH33 117 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 FOXH1O75593 365 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 TAS2R45P59539 299 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 PSG5Q15238 335 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 SPINK9Q5DT21 86 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 JKAMPQ9P055 326 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 HSPB8Q9UJY1 196 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 RHBDL1O75783 438 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 CA6P23280 308 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 FOXL2P58012 376 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 GDF5OSQ5U4N7 250 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 C2orf91Q6ZV80 131 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 OR2K2Q8NGT1 345 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 FAM216AQ8WUB2 273 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 SSMEM1Q8WWF3 244 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 C1orf159Q96HA4 380 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 CDX2Q99626 313 aaPredicted RBP10.72□□□□□ -0.69
VEGFA-215ENST00000497139 UNC80Q8N2C7 3258 aa10.72□□□□□ -0.69
VEGFA-215ENST00000497139 LMO7DNF2Z398 122 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 GFRA3O60609 400 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 C9orf135Q5VTT2 229 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 RPS19BP1Q86WX3 136 aaKnown RBP10.71□□□□□ -0.69
VEGFA-215ENST00000497139 DUSP13Q9UII6 198 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 ADAMTS20P59510 1910 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 TMEM30CPA0ZSE6 113 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 HIST1H1EP10412 219 aaKnown RBP10.71□□□□□ -0.69
VEGFA-215ENST00000497139 PLGLB1Q02325 96 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 GABRA6Q16445 453 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 WIPI1Q5MNZ9 446 aaPredicted RBP10.71□□□□□ -0.69
VEGFA-215ENST00000497139 LINC01545Q5VT33 79 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 ZNF808Q8N4W9 903 aaPredicted RBP10.71□□□□□ -0.69
VEGFA-215ENST00000497139 TMEM251Q8N6I4 163 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms