RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 NEUROG1Q92886 237 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HARBI1Q96MB7 349 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 SSX3Q99909 188 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 BSNQ9UPA5 3926 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 NBEAQ8NFP9 2946 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 TEX50A0A1B0GTY4 177 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 SHISA9B4DS77 424 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BKO60814 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BJP06899 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BOP23527 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BBP33778 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 GALR1P47211 349 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 CDX1P47902 265 aaPredicted RBP9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BDP58876 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BCP62807 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST2H2BEQ16778 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.04□□□□□ -0.96
CMSS1-208ENST00000496116 C8orf31Q8N9H6 132 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 OR5AN1Q8NGI8 311 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 ABHD5Q8WTS1 349 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BHQ93079 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 TMEM186Q96B77 213 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 FLYWCH2Q96CP2 140 aaKnown RBP9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BNQ99877 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HIST1H2BMQ99879 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 MRPL20Q9BYC9 149 aaKnown RBP9.04□□□□□ -0.96
CMSS1-208ENST00000496116 ZNRD1Q9P1U0 126 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 KAAG1Q9UBP8 84 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 APC2O95996 2303 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 E7EQL1 145 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 H0YJW9 148 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 TNFRSF13BO14836 293 aaPredicted RBP9.03□□□□□ -0.96
CMSS1-208ENST00000496116 CLN5O75503 358 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 MYOD1P15172 320 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 APOBEC3AP31941 199 aaPredicted RBP9.03□□□□□ -0.96
CMSS1-208ENST00000496116 ATP5G3P48201 142 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 EFNB3Q15768 340 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 TMEM177Q53S58 311 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 C2orf83Q53S99 150 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 LINC00311Q8N616 119 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 OR4C13Q8NGP0 309 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 OR1L8Q8NGR8 309 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 VSTM2AQ8TAG5 236 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 C1orf159Q96HA4 380 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 COMMD5Q9GZQ3 224 aa9.03□□□□□ -0.96
CMSS1-208ENST00000496116 B9A039 149 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 DVL1O14640 695 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 PFN1P07737 140 aaKnown RBP9.02□□□□□ -0.96
CMSS1-208ENST00000496116 CD3EP07766 207 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 IGFBP2P18065 325 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 USF1P22415 310 aaPredicted RBP9.02□□□□□ -0.96
CMSS1-208ENST00000496116 CASP6P55212 293 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 GNB1P62873 340 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 LYPD2Q6UXB3 125 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 SLC16A13Q7RTY0 426 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 TMEM144Q7Z5S9 345 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 PDPNQ86YL7 162 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 OR51G1Q8NGK1 321 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 OR4A5Q8NH83 315 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 TMEM204Q9BSN7 226 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 SRD5A3Q9H8P0 318 aa9.02□□□□□ -0.96
CMSS1-208ENST00000496116 PTPRZ1P23471 2315 aaPredicted RBP9.02□□□□□ -0.97
CMSS1-208ENST00000496116 PCNX1Q96RV3 2341 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 NDUFB4O95168 129 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 TRGC1P0CF51 173 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 NPPCP23582 126 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 S100A2P29034 98 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 RPL8P62917 257 aaKnown RBP9.02□□□□□ -0.97
CMSS1-208ENST00000496116 ERHP84090 104 aaKnown RBP9.02□□□□□ -0.97
CMSS1-208ENST00000496116 PRR20EP86478 221 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 PRR20CP86479 221 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 PRR20DP86480 221 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 PRR20BP86481 221 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 PRR20AP86496 221 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 KCNIP4Q6PIL6 250 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.97
CMSS1-208ENST00000496116 NECAP1Q8NC96 275 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 ZNF596Q8TC21 504 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 PYGO2Q9BRQ0 406 aa9.02□□□□□ -0.97
CMSS1-208ENST00000496116 SEPSECSQ9HD40 501 aaKnown RBP9.02□□□□□ -0.97
CMSS1-208ENST00000496116 ELOA3CA0A087WX78 387 aaPredicted RBP9.01□□□□□ -0.97
CMSS1-208ENST00000496116 IGHV1-69-2A0A0G2JMI3 117 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 A0A1W2PN81 502 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 PPP5D1E7EU14 171 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 PPP1R2P9O14990 202 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 FCN3O75636 299 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 FAM87AP0C7U9 286 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 CD99P14209 185 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 GCHFRP30047 84 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 CHRNA7P36544 502 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 SRP14P37108 136 aaKnown RBP9.01□□□□□ -0.97
CMSS1-208ENST00000496116 LINC01551Q86U37 167 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 FRZBQ92765 325 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 SLC35E1Q96K37 410 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 CTSZQ9UBR2 303 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 IL3RAP26951 378 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 LOXP28300 417 aaPredicted RBP9.01□□□□□ -0.97
CMSS1-208ENST00000496116 CHRNB4P30926 498 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 REG1BP48304 166 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 FAM78BQ5VT40 261 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms