RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 OR10G8Q8NGN5 311 aa10.69□□□□□ -0.7
PTPN7-217ENST00000495688 ANKRD11Q6UB99 2663 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-217ENST00000495688 TANC2Q9HCD6 1990 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 MMP23AO75900 390 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 PPP1R35Q8TAP8 253 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 FAM216AQ8WUB2 273 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 NDUFAF3Q9BU61 184 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 TMEM14BQ9NUH8 114 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 IDI2-AS1Q9NZ38 188 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 TP53TG3Q9ULZ0 132 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 PKDREJQ9NTG1 2253 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 NAV3Q8IVL0 2385 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 TRAV17A0A0B4J275 112 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 TRGV8A0A0C4DH27 118 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 EREGO14944 169 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 IGKV1-16P04430 117 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 HSPE1P61604 102 aaKnown RBP10.68□□□□□ -0.7
PTPN7-217ENST00000495688 ZNF90Q03938 601 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 MLANAQ16655 118 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 LOXL4Q96JB6 756 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 NOL4LQ96MY1 436 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-217ENST00000495688 TUBG2Q9NRH3 451 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 FKBP11Q9NYL4 201 aa10.68□□□□□ -0.7
PTPN7-217ENST00000495688 IGKV1OR2-108A0A075B7D4 117 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 LHBP01229 141 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 LRFN3Q9BTN0 628 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 RAI1Q7Z5J4 1906 aaPredicted RBP10.67□□□□□ -0.7
PTPN7-217ENST00000495688 SPAARA0A1B0GVQ0 90 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 CCKARP32238 428 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 LINC00310P59036 64 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 TAS2R60P59551 318 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 RHOBP62745 196 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 MRPS11P82912 194 aaKnown RBP10.67□□□□□ -0.7
PTPN7-217ENST00000495688 IQCJQ1A5X6 159 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 ZNF474Q6S9Z5 364 aaPredicted RBP10.67□□□□□ -0.7
PTPN7-217ENST00000495688 C22orf34Q6ZV56 151 aa10.67□□□□□ -0.7
PTPN7-217ENST00000495688 KBTBD11-OT1A0A1B0GTJ5 212 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 SRRM4A7MD48 611 aaKnown RBP10.66□□□□□ -0.7
PTPN7-217ENST00000495688 F2Z2F3 143 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 SPINK4O60575 86 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 LINC00869P0C866 280 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 BTF3P20290 206 aaKnown RBP10.66□□□□□ -0.7
PTPN7-217ENST00000495688 CFHR2P36980 270 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 KLF3P57682 345 aaPredicted RBP10.66□□□□□ -0.7
PTPN7-217ENST00000495688 MZT1Q08AG7 82 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 PSG5Q15238 335 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 DEFB109BQ30KR1 87 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 KRTCAP3Q53RY4 240 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 IGFL2Q6UWQ7 119 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 ZCCHC14Q8WYQ9 949 aaKnown RBP10.66□□□□□ -0.7
PTPN7-217ENST00000495688 MS4A10Q96PG2 267 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 CBLN4Q9NTU7 201 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 FOXA2Q9Y261 457 aaPredicted RBP10.66□□□□□ -0.7
PTPN7-217ENST00000495688 POLR3KQ9Y2Y1 108 aaPredicted RBP10.66□□□□□ -0.7
PTPN7-217ENST00000495688 OR51B2Q9Y5P1 312 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 ZZEF1O43149 2961 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 PLXNB1O43157 2135 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 ZNF292O60281 2723 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 RAB4BP61018 213 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 PRR20EP86478 221 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 PRR20CP86479 221 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 PRR20DP86480 221 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 PRR20BP86481 221 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 PRR20AP86496 221 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 ASPHD1Q5U4P2 390 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 FAM216BQ8N7L0 139 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 CCL13Q99616 98 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 ENY2Q9NPA8 101 aa10.66□□□□□ -0.7
PTPN7-217ENST00000495688 RPL29P47914 159 aaKnown RBP10.65□□□□□ -0.7
PTPN7-217ENST00000495688 YPEL3P61236 119 aaPredicted RBP10.65□□□□□ -0.7
PTPN7-217ENST00000495688 TGIF2LXQ8IUE1 241 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 EAF1Q96JC9 268 aaPredicted RBP10.65□□□□□ -0.7
PTPN7-217ENST00000495688 TXNDC17Q9BRA2 123 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 ATG101Q9BSB4 218 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 C2orf88Q9BSF0 95 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 RIF1Q5UIP0 2472 aaKnown RBP10.65□□□□□ -0.7
PTPN7-217ENST00000495688 CSMD1Q96PZ7 3565 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 J3QR06 171 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 CRYBB3P26998 211 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 KIR2DS2P43631 304 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 RAB7AP51149 207 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 SLC35B1P78383 322 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 TDRG1Q3Y452 100 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 DOLPP1Q86YN1 238 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 DEFB124Q8NES8 71 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 RND1Q92730 232 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
PTPN7-217ENST00000495688 GCM1Q9NP62 436 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 ASCL3Q9NQ33 180 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 IL36BQ9NZH7 164 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 TP53TG5Q9Y2B4 290 aa10.65□□□□□ -0.7
PTPN7-217ENST00000495688 SPTBN2O15020 2390 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 OR10J4P0C629 311 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 IER3P46695 156 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 ERVFC1-1P60608 527 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 OR10W1Q8NGF6 305 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 NEUROG1Q92886 237 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 ZNF503Q96F45 646 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 NABP2Q9BQ15 211 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms