RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 DEFB110Q30KQ9 67 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 LGALSLQ3ZCW2 172 aaPredicted RBP2.11□□□□□ -2.07
SMC4-224ENST00000494612 SLC36A2Q495M3 483 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 MRPL2Q5T653 305 aaKnown RBP2.11□□□□□ -2.07
SMC4-224ENST00000494612 HENMT1Q5T8I9 393 aaKnown RBP2.11□□□□□ -2.07
SMC4-224ENST00000494612 AMMECR1LQ6DCA0 310 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 OLIG3Q7RTU3 272 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 MARCH3Q86UD3 253 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 RIBC1Q8N443 379 aaPredicted RBP2.11□□□□□ -2.07
SMC4-224ENST00000494612 C2orf73Q8N5S3 287 aaPredicted RBP2.11□□□□□ -2.07
SMC4-224ENST00000494612 WFDC11Q8NEX6 87 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 OR4E2Q8NGC2 313 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 JOSD2Q8TAC2 188 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 STOML3Q8TAV4 291 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 MUC7Q8TAX7 377 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 LCN9Q8WX39 176 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 PPP1R14BQ96C90 147 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 ZNF586Q9NXT0 402 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 DNAJC12Q9UKB3 198 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 C14orf166Q9Y224 244 aaKnown RBP2.11□□□□□ -2.07
SMC4-224ENST00000494612 TRAPPC1Q9Y5R8 145 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 MYO7BQ6PIF6 2116 aa2.11□□□□□ -2.07
SMC4-224ENST00000494612 CCDC88CQ9P219 2028 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 NCOA6Q14686 2063 aaPredicted RBP2.1□□□□□ -2.07
SMC4-224ENST00000494612 A0A1B0GX78 115 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 FAM183AA6NL82 134 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 A8MWP4 228 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 C2orf74A8MZ97 194 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 POP7O75817 140 aaKnown RBP2.1□□□□□ -2.07
SMC4-224ENST00000494612 CA2P00918 260 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 MLNP12872 115 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 ELK4P28324 431 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 FAM3AP98173 230 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 SMAGPQ0VAQ4 97 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 C4orf26Q17RF5 130 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 CLEC12BQ2HXU8 276 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 HLA-DRB5Q30154 266 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 DEFB113Q30KQ7 82 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 DCUN1D2Q6PH85 259 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 DNM1P34Q6PK57 102 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 CYHR1Q6ZMK1 362 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 DCXRQ7Z4W1 244 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 DPPA2Q7Z7J5 298 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 DOLPP1Q86YN1 238 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 TMEM156Q8N614 296 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 OR11G2Q8NGC1 345 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 KCTD7Q96MP8 289 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 MCEEQ96PE7 176 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 UGT2B28Q9BY64 529 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 ARL6Q9H0F7 186 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 TXNIPQ9H3M7 391 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 POMPQ9Y244 141 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 NAV3Q8IVL0 2385 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 FBN1P35555 2871 aaKnown RBP2.1□□□□□ -2.07
SMC4-224ENST00000494612 CUBNO60494 3623 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 PKDREJQ9NTG1 2253 aa2.1□□□□□ -2.07
SMC4-224ENST00000494612 ANKHD1Q8IWZ3 2542 aaKnown RBP2.1□□□□□ -2.07
SMC4-224ENST00000494612 ANK2Q01484 3957 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 HIVEP2P31629 2446 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 CCDC168Q8NDH2 2452 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 TINCRA0A1B0GVN0 87 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 GMNCA6NCL1 334 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 A6NED7 52 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 SMIM23A6NLE4 172 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 SIGLEC16A6NMB1 481 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 F5H5P2 479 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 AZIN1O14977 448 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 BIRC5O15392 142 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 AHSA1O95433 338 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 TYMSP04818 313 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 SERPINA7P05543 415 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 CALB1P05937 261 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 PIRTP0C851 137 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 PTHLHP12272 177 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 GTF2F2P13984 249 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 CRABP2P29373 138 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 IFNGR2P38484 337 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 HSPA13P48723 471 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 SULT1A2P50226 295 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 ZNF83P51522 516 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 RPL26P61254 145 aaKnown RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 MAGOHP61326 146 aaKnown RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 MRPS15P82914 257 aaKnown RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 MEF2BQ02080 365 aaPredicted RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 TFF3Q07654 80 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 MLLT11Q13015 90 aaPredicted RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 COQ5Q5HYK3 327 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 FAM162BQ5T6X4 162 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 OGFRL1Q5TC84 451 aaPredicted RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 ZFAND6Q6FIF0 208 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 NT5DC3Q86UY8 548 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 EIF4E3Q8N5X7 224 aaKnown RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 OR2M3Q8NG83 312 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 OR8J2Q8NGG1 315 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 OR11L1Q8NGX0 322 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 CYGBQ8WWM9 190 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 MAL2Q969L2 176 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 SMIM19Q96E16 107 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 LYSMD1Q96S90 227 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 SNRNP25Q9BV90 132 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms