RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ZNF646O15015 1829 aaPredicted RBP16.98■□□□□ 0.31
RNF40-203ENST00000493683 ZNRF1Q8ND25 227 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 C21orf62Q9NYP8 219 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 SCO2A0A1W2PP80 73 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 GHRHP01286 108 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 ZNF883P0CG24 379 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 TFF3Q07654 80 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 LOC101059948A0A1B0GTJ6 334 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 TRGV3P03979 118 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 LINC00271P0C7V0 271 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 EGR1P18146 543 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 ATP5J2P56134 94 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 OTORQ9NRC9 128 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 LINC00312Q9Y6C7 94 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 ASXL3Q9C0F0 2248 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 TMEM144Q7Z5S9 345 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 C18orf12Q96KH6 178 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 GSN-AS1Q9NRJ2 163 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 STRCP1A6NGW2 1772 aa16.98■□□□□ 0.31
RNF40-203ENST00000493683 C17orf98A8MV24 154 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 ZNF324BQ6AW86 544 aaPredicted RBP16.97■□□□□ 0.31
RNF40-203ENST00000493683 KLRB1Q12918 225 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 TMEM170AQ8WVE7 144 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 ARFGEF1Q9Y6D6 1849 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 IQCF6A8MYZ5 107 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 RNASE1P07998 156 aaKnown RBP16.97■□□□□ 0.31
RNF40-203ENST00000493683 PLXNB2O15031 1838 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 TRBV6-7A0A0A0MS04 114 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 TRAV14DV4A0A0A6YYC5 116 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 ZNHIT1O43257 154 aa16.97■□□□□ 0.31
RNF40-203ENST00000493683 SHANK3Q9BYB0 1731 aa16.96■□□□□ 0.31
RNF40-203ENST00000493683 CCL20P78556 96 aa16.96■□□□□ 0.31
RNF40-203ENST00000493683 FBXL7Q9UJT9 491 aa16.96■□□□□ 0.31
RNF40-203ENST00000493683 CTSBP07858 339 aa16.96■□□□□ 0.31
RNF40-203ENST00000493683 CENPVQ7Z7K6 275 aaPredicted RBP16.96■□□□□ 0.31
RNF40-203ENST00000493683 FER1L6-AS1Q8NA97 138 aa16.96■□□□□ 0.31
RNF40-203ENST00000493683 ZNFX1Q9P2E3 1918 aaKnown RBP16.96■□□□□ 0.31
RNF40-203ENST00000493683 SLC17A3O00476 420 aa16.96■□□□□ 0.3
RNF40-203ENST00000493683 CECR9P0C854 216 aa16.96■□□□□ 0.3
RNF40-203ENST00000493683 OR13C6PQ8NH95 151 aa16.96■□□□□ 0.3
RNF40-203ENST00000493683 GDF15Q99988 308 aa16.96■□□□□ 0.3
RNF40-203ENST00000493683 DCTN5Q9BTE1 182 aa16.96■□□□□ 0.3
RNF40-203ENST00000493683 FAM90A9PA6NNJ1 464 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.95■□□□□ 0.3
RNF40-203ENST00000493683 ATXN7O15265 892 aaPredicted RBP16.95■□□□□ 0.3
RNF40-203ENST00000493683 GPR183P32249 361 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 LY6EQ16553 131 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 OR13A1Q8NGR1 328 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 BEX4Q9NWD9 120 aaPredicted RBP16.95■□□□□ 0.3
RNF40-203ENST00000493683 ATG2BQ96BY7 2078 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 MYO16Q9Y6X6 1858 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 A0A1B0GWB2 263 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 F8VVB4 439 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 F8VWA3 439 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 SPRED2Q7Z698 418 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 WNT10AQ9GZT5 417 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 SEMA5BQ9P283 1151 aa16.95■□□□□ 0.3
RNF40-203ENST00000493683 RPL23P62829 140 aaKnown RBP16.94■□□□□ 0.3
RNF40-203ENST00000493683 C5orf30Q96GV9 206 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 FOXC2Q99958 501 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 GFRA3O60609 400 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 ATP5G3P48201 142 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 TGIF1Q15583 401 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 FAM169BQ8N8A8 192 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 ARPC1AQ92747 370 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 ASCL2Q99929 193 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 UNC13CQ8NB66 2214 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 CCL1P22362 96 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 PRR19A6NJB7 356 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 YPEL1O60688 119 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 PVRIGQ6DKI7 326 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 PPP1R27Q86WC6 154 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 LTBP4Q8N2S1 1624 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 YPEL2Q96QA6 119 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 SLC50A1Q9BRV3 221 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 OSTCQ9NRP0 149 aa16.94■□□□□ 0.3
RNF40-203ENST00000493683 ZNF600Q6ZNG1 722 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 FOXA2Q9Y261 457 aaPredicted RBP16.93■□□□□ 0.3
RNF40-203ENST00000493683 SPCS1Q9Y6A9 102 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 CD69Q07108 199 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 OR4X2Q8NGF9 303 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 Q9H3A6 140 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 FBXL15Q9H469 300 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 ADAMTSL1Q8N6G6 1762 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 M0R381 172 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 AKIRIN1Q9H9L7 192 aaPredicted RBP16.93■□□□□ 0.3
RNF40-203ENST00000493683 C14orf144Q96I85 54 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 IMMP2LQ96T52 175 aa16.93■□□□□ 0.3
RNF40-203ENST00000493683 NUP37Q8NFH4 326 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 C18orf15Q96N68 181 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 FAM186AA6NE01 2351 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 IGHV2OR16-5A0A0B4J2B6 119 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 EFEMP2O95967 443 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 LINC01549A6NIU2 74 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 UPK2O00526 184 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 IGLV3-19P01714 112 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 MIR17HGQ75NE6 70 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 CCL19Q99731 98 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 A0A1W2PRE2 83 aa16.92■□□□□ 0.3
RNF40-203ENST00000493683 C9JCJ5 164 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms