RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 HSD17B6O14756 317 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 NDUFB6O95139 128 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 SNRPCP09234 159 aaKnown RBP7.55□□□□□ -1.2
CSTF1-206ENST00000493039 HERV-K104P61576 105 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 ZNF616Q08AN1 781 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 FABP9Q0Z7S8 132 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 ZNF645Q8N7E2 425 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 BVESQ8NE79 360 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 DUSP18Q8NEJ0 188 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 RTN4IP1Q8WWV3 396 aaPredicted RBP7.55□□□□□ -1.2
CSTF1-206ENST00000493039 TMEM230Q96A57 120 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 PHB2Q99623 299 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 PIPOXQ9P0Z9 390 aa7.55□□□□□ -1.2
CSTF1-206ENST00000493039 RBM7Q9Y580 266 aaKnown RBP7.55□□□□□ -1.2
CSTF1-206ENST00000493039 A0A1W2PPI3 338 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 HAX1O00165 279 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 CYB5BO43169 146 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 TNFSF12O43508 249 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 IFNA5P01569 189 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 PF4P02776 101 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 EPHA1P21709 976 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 RAB31Q13636 194 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 C5orf47Q569G3 176 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 TPTE2P1Q5T6R2 138 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 MINOS1Q5TGZ0 78 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 C9orf139Q6ZV77 190 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 ADAD2Q8NCV1 583 aaKnown RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 PIFOQ8TCI5 191 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 MALSU1Q96EH3 234 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 HYLS1Q96M11 299 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 SLC25A21Q9BQT8 299 aaPredicted RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 SNHG12Q9BXW3 62 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 MRPL20Q9BYC9 149 aaKnown RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 MINOS1-NBL1R4GNA1 71 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 SETD2Q9BYW2 2564 aaPredicted RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 MDFIC2A0A1B0GVS7 189 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 FAM240BA0A1B0GVZ2 78 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 INAFM1C9JVW0 142 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 PGLYRP1O75594 196 aaPredicted RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 ANXA3P12429 323 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 DUTP33316 252 aaKnown RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 LGALS4P56470 323 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 SURF2Q15527 256 aaPredicted RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 COX19Q49B96 90 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 PHLDA2Q53GA4 152 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 GLDNQ6ZMI3 551 aaPredicted RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 SSX7Q7RTT5 188 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 HSD17B13Q7Z5P4 300 aaPredicted RBP7.54□□□□□ -1.2
CSTF1-206ENST00000493039 DDB2Q92466 427 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 NABP2Q9BQ15 211 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 WFDC1Q9HC57 220 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 SLC2A9Q9NRM0 540 aa7.54□□□□□ -1.2
CSTF1-206ENST00000493039 IGHV1-3A0A0C4DH29 117 aa7.53□□□□□ -1.2
CSTF1-206ENST00000493039 M0R1X1 148 aa7.53□□□□□ -1.2
CSTF1-206ENST00000493039 GPR31O00270 319 aa7.53□□□□□ -1.2
CSTF1-206ENST00000493039 CTSDP07339 412 aaPredicted RBP7.53□□□□□ -1.2
CSTF1-206ENST00000493039 SSBP2P81877 361 aaPredicted RBP7.53□□□□□ -1.2
CSTF1-206ENST00000493039 ZNF816Q0VGE8 651 aaPredicted RBP7.53□□□□□ -1.2
CSTF1-206ENST00000493039 MSMO1Q15800 293 aa7.53□□□□□ -1.2
CSTF1-206ENST00000493039 DEFB112Q30KQ8 113 aa7.53□□□□□ -1.2
CSTF1-206ENST00000493039 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.53□□□□□ -1.2
CSTF1-206ENST00000493039 TSNAXQ99598 290 aaKnown RBP7.53□□□□□ -1.2
CSTF1-206ENST00000493039 MEGF9Q9H1U4 602 aa7.53□□□□□ -1.2
CSTF1-206ENST00000493039 IGHV3-72A0A0B4J1Y9 119 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 TIMM23O14925 209 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 DFFBO76075 338 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 OR8U8P0C7N1 319 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 PGAM2P15259 253 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 CD24P25063 80 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 PIGPP57054 158 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 SUPT4H1P63272 117 aaKnown RBP7.52□□□□□ -1.2
CSTF1-206ENST00000493039 EXOSC2Q13868 293 aaKnown RBP7.52□□□□□ -1.2
CSTF1-206ENST00000493039 DHRS7BQ6IAN0 325 aaPredicted RBP7.52□□□□□ -1.2
CSTF1-206ENST00000493039 FAM71F2Q6NXP2 309 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 ZDHHC22Q8N966 263 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 OR5AN1Q8NGI8 311 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 RPEQ96AT9 228 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 AKR1E2Q96JD6 320 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 RITA1Q96K30 269 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 S1PR3Q99500 378 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 DPAGT1Q9H3H5 408 aa7.52□□□□□ -1.2
CSTF1-206ENST00000493039 AMMECR1Q9Y4X0 333 aaPredicted RBP7.52□□□□□ -1.2
CSTF1-206ENST00000493039 M0QXV9 152 aa7.52□□□□□ -1.21
CSTF1-206ENST00000493039 ARPC1BO15143 372 aaKnown RBP7.52□□□□□ -1.21
CSTF1-206ENST00000493039 APOC3P02656 99 aa7.52□□□□□ -1.21
CSTF1-206ENST00000493039 GAPDHP04406 335 aaKnown RBP7.52□□□□□ -1.21
CSTF1-206ENST00000493039 VSIG10L2P0DP72 767 aa7.52□□□□□ -1.21
CSTF1-206ENST00000493039 RND3P61587 244 aa7.52□□□□□ -1.21
CSTF1-206ENST00000493039 C20orf85Q9H1P6 137 aa7.52□□□□□ -1.21
CSTF1-206ENST00000493039 ARV1Q9H2C2 271 aa7.52□□□□□ -1.21
CSTF1-206ENST00000493039 DNAJC4Q9NNZ3 241 aa7.52□□□□□ -1.21
CSTF1-206ENST00000493039 JMJD1CQ15652 2540 aa7.52□□□□□ -1.21
CSTF1-206ENST00000493039 FAM90A9PA6NNJ1 464 aa7.51□□□□□ -1.21
CSTF1-206ENST00000493039 H0YJW9 148 aa7.51□□□□□ -1.21
CSTF1-206ENST00000493039 MPPED1O15442 326 aa7.51□□□□□ -1.21
CSTF1-206ENST00000493039 IGKV1-16P04430 117 aa7.51□□□□□ -1.21
CSTF1-206ENST00000493039 RLN1P04808 185 aa7.51□□□□□ -1.21
CSTF1-206ENST00000493039 ECI1P42126 302 aa7.51□□□□□ -1.21
CSTF1-206ENST00000493039 RAB5CP51148 216 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms