RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 WT1-ASQ06250 92 aa18.8■□□□□ 0.6
UPF3A-209ENST00000492270 STEAP1BQ6NZ63 245 aa18.8■□□□□ 0.6
UPF3A-209ENST00000492270 OR1L8Q8NGR8 309 aa18.8■□□□□ 0.6
UPF3A-209ENST00000492270 SEC22AQ96IW7 307 aa18.8■□□□□ 0.6
UPF3A-209ENST00000492270 HINT2Q9BX68 163 aa18.8■□□□□ 0.6
UPF3A-209ENST00000492270 FAM212BQ9NTI7 297 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-209ENST00000492270 OR51B2Q9Y5P1 312 aa18.8■□□□□ 0.6
UPF3A-209ENST00000492270 MFSD2BA6NFX1 497 aa18.79■□□□□ 0.6
UPF3A-209ENST00000492270 MRPS10P82664 201 aaKnown RBP18.79■□□□□ 0.6
UPF3A-209ENST00000492270 SCGB2B2Q4G0G5 96 aa18.79■□□□□ 0.6
UPF3A-209ENST00000492270 CLEC19AQ6UXS0 136 aa18.79■□□□□ 0.6
UPF3A-209ENST00000492270 MRGPRFQ96AM1 343 aa18.79■□□□□ 0.6
UPF3A-209ENST00000492270 SRSF8Q9BRL6 282 aaKnown RBP18.79■□□□□ 0.6
UPF3A-209ENST00000492270 NDUFA4L2Q9NRX3 87 aa18.79■□□□□ 0.6
UPF3A-209ENST00000492270 SNAPC5O75971 98 aa18.78■□□□□ 0.6
UPF3A-209ENST00000492270 OR13C7P0DN81 318 aa18.78■□□□□ 0.6
UPF3A-209ENST00000492270 PIGPP57054 158 aa18.78■□□□□ 0.6
UPF3A-209ENST00000492270 RND3P61587 244 aa18.78■□□□□ 0.6
UPF3A-209ENST00000492270 SSBP1Q04837 148 aaKnown RBP18.78■□□□□ 0.6
UPF3A-209ENST00000492270 TATDN3Q17R31 274 aa18.78■□□□□ 0.6
UPF3A-209ENST00000492270 CADM3Q8N126 398 aa18.78■□□□□ 0.6
UPF3A-209ENST00000492270 EEF1AKMT3Q96AZ1 226 aa18.78■□□□□ 0.6
UPF3A-209ENST00000492270 ZNF486Q96H40 463 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-209ENST00000492270 OR2C1O95371 312 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 EDN2P20800 178 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 PTBP1P26599 531 aaKnown RBP eCLIP18.77■□□□□ 0.6
UPF3A-209ENST00000492270 ARL3P36405 182 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 THOC7Q6I9Y2 204 aaKnown RBP18.77■□□□□ 0.6
UPF3A-209ENST00000492270 GDPD1Q8N9F7 314 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 OR13C8Q8NGS7 320 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 TERB2Q8NHR7 220 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 MARCH1Q8TCQ1 289 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 TP53RKQ96S44 253 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 SMAD5-AS1Q9Y6J3 95 aa18.77■□□□□ 0.6
UPF3A-209ENST00000492270 C15orf61A6NNL5 157 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 CTDSPLO15194 276 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 GGCTO75223 188 aaKnown RBP18.76■□□□□ 0.59
UPF3A-209ENST00000492270 SERPINE2P07093 398 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 FAM209BQ5JX69 171 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 ADAMTSL5Q6ZMM2 481 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 MCFD2Q8NI22 146 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 LSM10Q969L4 123 aaKnown RBP18.76■□□□□ 0.59
UPF3A-209ENST00000492270 ASCL2Q99929 193 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 TMEM14BQ9NUH8 114 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 PRNDQ9UKY0 176 aa18.76■□□□□ 0.59
UPF3A-209ENST00000492270 H0Y980 276 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 TNFSF8P32971 234 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 MFAP2P55001 183 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 IZUMO4Q1ZYL8 232 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 H2BFWTQ7Z2G1 175 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 OR4C16Q8NGL9 310 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 TSC22D3Q99576 134 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 NXF2Q9GZY0 626 aaKnown RBP18.75■□□□□ 0.59
UPF3A-209ENST00000492270 ZC4H2Q9NQZ6 224 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 PEMTQ9UBM1 199 aa18.75■□□□□ 0.59
UPF3A-209ENST00000492270 HSD17B13Q7Z5P4 300 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-209ENST00000492270 OR5B3Q8NH48 314 aa18.74■□□□□ 0.59
UPF3A-209ENST00000492270 SIGLEC8Q9NYZ4 499 aa18.74■□□□□ 0.59
UPF3A-209ENST00000492270 TRBV7-1A0A0A6YYK4 115 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 C3orf85A0A1B0GTC6 90 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 IZUMO1RA6ND01 250 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 CCDC160A6NGH7 325 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 IGKV1-5P01602 117 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 MEF2DQ14814 521 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 SP6Q3SY56 376 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 ZNF502Q8TBZ5 544 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 ZFAND1Q8TCF1 268 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 CXorf58Q96LI9 332 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 FKBP11Q9NYL4 201 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 COPZ2Q9P299 210 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 RABL2AQ9UBK7 228 aaPredicted RBP18.73■□□□□ 0.59
UPF3A-209ENST00000492270 RABL2BQ9UNT1 228 aa18.73■□□□□ 0.59
UPF3A-209ENST00000492270 F11RQ9Y624 299 aaKnown RBP18.73■□□□□ 0.59
UPF3A-209ENST00000492270 CLEC3BP05452 202 aa18.72■□□□□ 0.59
UPF3A-209ENST00000492270 AKAIN1P0CW23 69 aa18.72■□□□□ 0.59
UPF3A-209ENST00000492270 GPR183P32249 361 aa18.72■□□□□ 0.59
UPF3A-209ENST00000492270 MECP2P51608 486 aaKnown RBP18.72■□□□□ 0.59
UPF3A-209ENST00000492270 SLC25A24Q6NUK1 477 aa18.72■□□□□ 0.59
UPF3A-209ENST00000492270 OR4A16Q8NH70 328 aa18.72■□□□□ 0.59
UPF3A-209ENST00000492270 SOSTQ9BQB4 213 aa18.72■□□□□ 0.59
UPF3A-209ENST00000492270 RBM38Q9H0Z9 239 aaKnown RBP18.72■□□□□ 0.59
UPF3A-209ENST00000492270 THYN1Q9P016 225 aa18.72■□□□□ 0.59
UPF3A-209ENST00000492270 IGHV3-21A0A0B4J1V1 117 aa18.71■□□□□ 0.59
UPF3A-209ENST00000492270 GSTZ1O43708 216 aaPredicted RBP18.71■□□□□ 0.59
UPF3A-209ENST00000492270 CTSDP07339 412 aaPredicted RBP18.71■□□□□ 0.59
UPF3A-209ENST00000492270 Q8N1Y9 231 aa18.71■□□□□ 0.59
UPF3A-209ENST00000492270 CCDC71LQ8N9Z2 235 aa18.71■□□□□ 0.59
UPF3A-209ENST00000492270 TMEM56Q96MV1 263 aa18.71■□□□□ 0.59
UPF3A-209ENST00000492270 FABP12A6NFH5 140 aa18.7■□□□□ 0.58
UPF3A-209ENST00000492270 C2orf70A6NJV1 201 aa18.7■□□□□ 0.58
UPF3A-209ENST00000492270 DISC1C4P0D8 188 aa18.7■□□□□ 0.58
UPF3A-209ENST00000492270 GPHB5Q86YW7 130 aa18.7■□□□□ 0.58
UPF3A-209ENST00000492270 CACNG8Q8WXS5 425 aa18.7■□□□□ 0.58
UPF3A-209ENST00000492270 RTBDNQ9BSG5 229 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-209ENST00000492270 RSL24D1Q9UHA3 163 aaKnown RBP18.7■□□□□ 0.58
UPF3A-209ENST00000492270 SELENOKQ9Y6D0 94 aa18.7■□□□□ 0.58
UPF3A-209ENST00000492270 ANKRD20A5PA0PJZ0 165 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 LGALS9O00182 355 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 FRMD6-AS1P0C7T7 363 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 P0C879 139 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms