RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	TMEM106B	Q9NUM4	274 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833		Q9UFV3	132 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	MIOX	Q9UGB7	285 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	RALY	Q9UKM9	306 aa	Known RBP	5.21	□□□□□ -1.58
FN1-223	ENST00000490833	FZR1	Q9UM11	496 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	WASHC3	Q9Y3C0	194 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	MSRB2	Q9Y3D2	182 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	PXMP4	Q9Y6I8	212 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	FAM186A	A6NE01	2351 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	GPR179	Q6PRD1	2367 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	IGHV3-43	A0A0B4J1X8	118 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833		A0A1B0GV50	99 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	PAGE4	O60829	102 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	GOSR1	O95249	250 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	OR9G9	P0C7N8	305 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	IGHV3-43D	P0DP04	118 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	EGR1	P18146	543 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	CCKAR	P32238	428 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	CEACAM3	P40198	252 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	RPL35	P42766	123 aa	Known RBP	5.2	□□□□□ -1.58
FN1-223	ENST00000490833	GALR1	P47211	349 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	PPOX	P50336	477 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	ZNF134	P52741	427 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	PAX2	Q02962	417 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	BSPH1	Q075Z2	132 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	ADIRF	Q15847	76 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	ZNF726P1	Q15940	193 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	TBR1	Q16650	682 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	CST9LP1	Q5W188	147 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	ACSM6	Q6P461	480 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	SPNS3	Q6ZMD2	512 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833		Q6ZS46	218 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	TGIF2LX	Q8IUE1	241 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	MMD2	Q8IY49	270 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	ST6GALNAC3	Q8NDV1	305 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	BEND2	Q8NDZ0	799 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	PRSS33	Q8NF86	280 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	OR51G1	Q8NGK1	321 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	OR4P4	Q8NGL7	312 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	TMEM167A	Q8TBQ9	72 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	NEU4	Q8WWR8	484 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-223	ENST00000490833	CYYR1	Q96J86	154 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	CCL13	Q99616	98 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	PARL	Q9H300	379 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	FUT9	Q9Y231	359 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	ARID1A	O14497	2285 aa		5.2	□□□□□ -1.58
FN1-223	ENST00000490833	IGHV3OR15-7	A0A075B7D8	119 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	IGHV1-69-2	A0A0G2JMI3	117 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	MDFIC2	A0A1B0GVS7	189 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	DPRX	A6NFQ7	191 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	OOSP1	A8MZH6	123 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	PRSS46	E5RG02	174 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	TNFRSF13B	O14836	293 aa	Predicted RBP	5.19	□□□□□ -1.58
FN1-223	ENST00000490833	GGCT	O75223	188 aa	Known RBP	5.19	□□□□□ -1.58
FN1-223	ENST00000490833	PROP1	O75360	226 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	GYPA	P02724	150 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	MT-ND6	P03923	174 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	PFN1	P07737	140 aa	Known RBP	5.19	□□□□□ -1.58
FN1-223	ENST00000490833	CT45A6	P0DMU7	189 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	CT45A5	P0DMU8	189 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	CT45A7	P0DMV0	189 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	TAS2R60	P59551	318 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	RPS16	P62249	146 aa	Known RBP	5.19	□□□□□ -1.58
FN1-223	ENST00000490833	RPL23	P62829	140 aa	Known RBP	5.19	□□□□□ -1.58
FN1-223	ENST00000490833	CCL8	P80075	99 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	KLRB1	Q12918	225 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	LTC4S	Q16873	150 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	IZUMO4	Q1ZYL8	232 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	TIGIT	Q495A1	244 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	RPL39P5	Q59GN2	51 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	COA6	Q5JTJ3	125 aa	Known RBP	5.19	□□□□□ -1.58
FN1-223	ENST00000490833	FAM162B	Q5T6X4	162 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	TMEM200B	Q69YZ2	307 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	ALKBH2	Q6NS38	261 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	WDR73	Q6P4I2	378 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	RASL11A	Q6T310	242 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	C1orf122	Q6ZSJ8	110 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	SPACA3	Q8IXA5	215 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	TPRX1	Q8N7U7	411 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	ZNF383	Q8NA42	475 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	ZNF114	Q8NC26	417 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	UBALD1	Q8TB05	177 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833		Q8WTZ3	238 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	CCL17	Q92583	94 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	C11orf52	Q96A22	123 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	ISOC2	Q96AB3	205 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	HARBI1	Q96MB7	349 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	GGTLC1	Q9BX51	225 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	OR51M1	Q9H341	326 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	SLC25A22	Q9H936	323 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	DNAJC4	Q9NNZ3	241 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	NDUFA4L2	Q9NRX3	87 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	OTOGL	Q3ZCN5	2332 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	CACNA1H	O95180	2353 aa		5.19	□□□□□ -1.58
FN1-223	ENST00000490833	HEATR1	Q9H583	2144 aa	Known RBP	5.18	□□□□□ -1.58
FN1-223	ENST00000490833	CACNA1D	Q01668	2161 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	IGHV3-64D	A0A0J9YX35	117 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	TEX50	A0A1B0GTY4	177 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	HELT	A6NFD8	242 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833		H0YJW9	148 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms