RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CTRB2Q6GPI1 263 aa9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 H2BFWTQ7Z2G1 175 aa9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 LHFPL5Q8TAF8 219 aa9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 TMEM230Q96A57 120 aa9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 FANCD2OSQ96PS1 177 aa9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 SDHCQ99643 169 aaPredicted RBP9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 NAA60Q9H7X0 242 aa9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 FAM212BQ9NTI7 297 aaPredicted RBP9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 AURKAIP1Q9NWT8 199 aaPredicted RBP9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 GPR132Q9UNW8 380 aa9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 DMRT1Q9Y5R6 373 aa9.44□□□□□ -0.9
SMARCD3-213ENST00000489503 TRBV9A0A0B4J1U6 114 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 A0A0G2JLM5 398 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 TEX13DA0A0J9YY54 714 aaPredicted RBP9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 LINC00854A0A1B0GVQ3 168 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 OVOL1O14753 267 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 BRI3O95415 125 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 TRAPPC2P0DI81 140 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 TRAPPC2BP0DI82 140 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 UCP1P25874 307 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 WT1-ASQ06250 92 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 SURF2Q15527 256 aaPredicted RBP9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 C15orf32Q32M92 178 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 ZNF343Q6P1L6 599 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 HAPLN4Q86UW8 402 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 SLC25A42Q86VD7 318 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 OR1L8Q8NGR8 309 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 SCP2D1Q9UJQ7 156 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
SMARCD3-213ENST00000489503 IGLV11-55A0A075B6I3 123 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 MFSD2BA6NFX1 497 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 CRYM-AS1A6NIL9 109 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 FAM223BA6NKX1 122 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 PPP5D1E7EU14 171 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 DUS4LO95620 317 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 CRYGCP07315 174 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 P0C879 139 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 OR13C7P0DN81 318 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 ECI1P42126 302 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 MECP2P51608 486 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 ATP5G2Q06055 141 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 PDLIM3Q53GG5 364 aaPredicted RBP9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 TRIQKQ629K1 86 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 FAM223AQ8IWN6 122 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 NECAP1Q8NC96 275 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 OR4A16Q8NH70 328 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 RNASE11Q8TAA1 199 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 USMG5Q96IX5 58 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 MCRIP2Q9BUT9 160 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 NDUFA4L2Q9NRX3 87 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 TMEM14BQ9NUH8 114 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 PEF1Q9UBV8 284 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 PRNDQ9UKY0 176 aa9.42□□□□□ -0.9
SMARCD3-213ENST00000489503 IGHV3-21A0A0B4J1V1 117 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 WI2-2373I1.2A0A1W2PRP0 233 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 BMPR1BO00238 502 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 HLA-AP01891 365 aaKnown RBP9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 DEFA4P12838 97 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 AKR1C4P17516 323 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 FAUP35544 74 aaKnown RBP9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 MFAP2P55001 183 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 AP3S2P59780 193 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 CNPY1Q3B7I2 92 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 C9orf66Q5T8R8 295 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 TMED4Q7Z7H5 227 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 GDPD1Q8N9F7 314 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 GLYATL2Q8WU03 294 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 LSM10Q969L4 123 aaKnown RBP9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 CCDC140Q96MF4 163 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 TSC22D3Q99576 134 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 TMEM222Q9H0R3 208 aa9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
SMARCD3-213ENST00000489503 A0A0B4J293 547 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 A6NHS1 94 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 SAP30O75446 220 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 FGF2P09038 288 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 INPP1P49441 399 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 CCR6P51684 374 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 SYNJ2BPP57105 145 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 SUPT4H1P63272 117 aaKnown RBP9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 EGFEM1PQ0D2K5 195 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 TMEM268Q5VZI3 342 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 Q6ZRM9 215 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 SELENOHQ8IZQ5 122 aaKnown RBP9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 GPR61Q9BZJ8 451 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 ZC4H2Q9NQZ6 224 aa9.4□□□□□ -0.9
SMARCD3-213ENST00000489503 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 K7EIL1 84 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 ST8SIA3O43173 380 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 NXPH3O95157 252 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 DHFRP00374 187 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 IL7P13232 177 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 ZP3P21754 424 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 PRCDQ00LT1 54 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 TMEM187Q14656 261 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 RPEL1Q2QD12 228 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 THOC7Q6I9Y2 204 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 C11orf87Q6NUJ2 197 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 SGPP2Q8IWX5 399 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms