RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
HLA-F-229ENST00000489502 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 ATG12O94817 140 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 PF4P02776 101 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 FGF2P09038 288 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 TRAPPC2P0DI81 140 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 TRAPPC2BP0DI82 140 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 ANXA7P20073 488 aaKnown RBP11.19□□□□□ -0.62
HLA-F-229ENST00000489502 CDX1P47902 265 aaPredicted RBP11.19□□□□□ -0.62
HLA-F-229ENST00000489502 IFITM3Q01628 133 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 TMEM128Q5BJH2 165 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 SPINK9Q5DT21 86 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 SLC25A42Q86VD7 318 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 CADM3Q8N126 398 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 RRNAD1Q96FB5 475 aaKnown RBP11.19□□□□□ -0.62
HLA-F-229ENST00000489502 TMEM56Q96MV1 263 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 C20orf85Q9H1P6 137 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 SLA2Q9H6Q3 261 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 KCNIP3Q9Y2W7 256 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 TMEM56-RWDD3S4R434 201 aa11.19□□□□□ -0.62
HLA-F-229ENST00000489502 CMYA5Q8N3K9 4069 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 A0A0B4J293 547 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 NPIPB5A8MRT5 1133 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 H3BUA1 57 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 ANXA3P12429 323 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 PSMB6P28072 239 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 RHOGP84095 191 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 WT1-ASQ06250 92 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 ASAH1Q13510 395 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 ANKRD55Q3KP44 614 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 RAX2Q96IS3 184 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 ZNF257Q9Y2Q1 563 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 NOTCH1P46531 2555 aa11.18□□□□□ -0.62
HLA-F-229ENST00000489502 FBN3Q75N90 2809 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 TRAV6A0A075B6T7 132 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 ST8SIA3O43173 380 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 OR2J3O76001 311 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 SFT2D2O95562 160 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 HLA-AP01891 365 aaKnown RBP11.17□□□□□ -0.62
HLA-F-229ENST00000489502 OR13C7P0DN81 318 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 CTRB1P17538 263 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 SLC6A1P30531 599 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 MECP2P51608 486 aaKnown RBP11.17□□□□□ -0.62
HLA-F-229ENST00000489502 CTRB2Q6GPI1 263 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 Q6ZRM9 215 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 LYZL2Q7Z4W2 148 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 LGI3Q8N145 548 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 OR5B3Q8NH48 314 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 IL22RA2Q969J5 263 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 LSM10Q969L4 123 aaKnown RBP11.17□□□□□ -0.62
HLA-F-229ENST00000489502 GPR146Q96CH1 333 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 NUDT15Q9NV35 164 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 FKBP11Q9NYL4 201 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 CACNG5Q9UF02 275 aa11.17□□□□□ -0.62
HLA-F-229ENST00000489502 I3L521 148 aa11.16□□□□□ -0.62
HLA-F-229ENST00000489502 CCL24O00175 119 aa11.16□□□□□ -0.62
HLA-F-229ENST00000489502 NXPH3O95157 252 aa11.16□□□□□ -0.62
HLA-F-229ENST00000489502 TCRBP04435 133 aa11.16□□□□□ -0.62
HLA-F-229ENST00000489502 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
HLA-F-229ENST00000489502 RAB25P57735 213 aa11.16□□□□□ -0.62
HLA-F-229ENST00000489502 SRPXP78539 464 aa11.16□□□□□ -0.62
HLA-F-229ENST00000489502 PRCDQ00LT1 54 aa11.16□□□□□ -0.62
HLA-F-229ENST00000489502 THOC7Q6I9Y2 204 aaKnown RBP11.16□□□□□ -0.62
HLA-F-229ENST00000489502 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 A0A087WW49 117 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 A0A0B4J2A0 478 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 FAM240BA0A1B0GVZ2 78 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 C9orf170A2RU37 121 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 CRYGCP07315 174 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 OR4E1P0C645 316 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 DEFA4P12838 97 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 UBE2MP61081 183 aaKnown RBP11.15□□□□□ -0.62
HLA-F-229ENST00000489502 HSPE1P61604 102 aaKnown RBP11.15□□□□□ -0.62
HLA-F-229ENST00000489502 DHRS2Q13268 280 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 EXOSC2Q13868 293 aaKnown RBP11.15□□□□□ -0.62
HLA-F-229ENST00000489502 C4orf46Q504U0 113 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 NMSQ5H8A3 153 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 MZT2BQ6NZ67 158 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 ZNF429Q86V71 674 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 FAM219AQ8IW50 185 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 MRPL41Q8IXM3 137 aaKnown RBP11.15□□□□□ -0.62
HLA-F-229ENST00000489502 LINC00482Q8N8I6 264 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 ENKURQ8TC29 256 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 P2RX4Q99571 388 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 SRSF8Q9BRL6 282 aaKnown RBP11.15□□□□□ -0.62
HLA-F-229ENST00000489502 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 SHPKQ9UHJ6 478 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 DMRT1Q9Y5R6 373 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 S4R3C0 116 aa11.15□□□□□ -0.62
HLA-F-229ENST00000489502 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 TRBV9A0A0B4J1U6 114 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 FAM223BA6NKX1 122 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 BRI3O95415 125 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 IFNA17P01571 189 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms