RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CYB5BO43169 146 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 RBMXL2O75526 392 aaKnown RBP10.29□□□□□ -0.76
CCL28-202ENST00000489442 LY86O95711 162 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 CRYGCP07315 174 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 CTRB1P17538 263 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 MECP2P51608 486 aaKnown RBP10.29□□□□□ -0.76
CCL28-202ENST00000489442 FAM209BQ5JX69 171 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 CTRB2Q6GPI1 263 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 THOC7Q6I9Y2 204 aaKnown RBP10.29□□□□□ -0.76
CCL28-202ENST00000489442 ACSM6Q6P461 480 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 C19orf35Q6ZS72 473 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 HSD17B13Q7Z5P4 300 aaPredicted RBP10.29□□□□□ -0.76
CCL28-202ENST00000489442 CADM3Q8N126 398 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 OR4C16Q8NGL9 310 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 OR13C8Q8NGS7 320 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 OR4A16Q8NH70 328 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 PRRT1Q99946 306 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 THAP7Q9BT49 309 aaPredicted RBP10.29□□□□□ -0.76
CCL28-202ENST00000489442 RBM38Q9H0Z9 239 aaKnown RBP10.29□□□□□ -0.76
CCL28-202ENST00000489442 MCUBQ9NWR8 336 aa10.29□□□□□ -0.76
CCL28-202ENST00000489442 C3orf85A0A1B0GTC6 90 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 ANKRD20A5PA0PJZ0 165 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 CGB1A6NKQ9 187 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 H0Y980 276 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 ATG12O94817 140 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 TRBV12-3P01733 135 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 CTSDP07339 412 aaPredicted RBP10.28□□□□□ -0.76
CCL28-202ENST00000489442 OR13C7P0DN81 318 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 PTBP1P26599 531 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCL28-202ENST00000489442 SYNJ2BPP57105 145 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 DCTN2Q13561 401 aaKnown RBP10.28□□□□□ -0.76
CCL28-202ENST00000489442 TRIM16LQ309B1 348 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 OR10W1Q8NGF6 305 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 MRGPRFQ96AM1 343 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 SEC22AQ96IW7 307 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 TMEM56Q96MV1 263 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 FANCD2OSQ96PS1 177 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 THYN1Q9P016 225 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 SCP2D1Q9UJQ7 156 aa10.28□□□□□ -0.76
CCL28-202ENST00000489442 TEX13DA0A0J9YY54 714 aaPredicted RBP10.27□□□□□ -0.77
CCL28-202ENST00000489442 IGLC7A0M8Q6 106 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 NDUFB8O95169 186 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 AKR1C2P52895 323 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.77
CCL28-202ENST00000489442 SURF2Q15527 256 aaPredicted RBP10.27□□□□□ -0.77
CCL28-202ENST00000489442 SPANXN2Q5MJ10 180 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 Q8N402 240 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 OR51S1Q8NGJ8 323 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 OR6Q1Q8NGQ2 317 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 OR5B3Q8NH48 314 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 RNASE11Q8TAA1 199 aaKnown RBP10.27□□□□□ -0.77
CCL28-202ENST00000489442 LSM10Q969L4 123 aaKnown RBP10.27□□□□□ -0.77
CCL28-202ENST00000489442 EEF1AKMT3Q96AZ1 226 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 CXorf58Q96LI9 332 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 PRR25Q96S07 402 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 TP53RKQ96S44 253 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 SOSTQ9BQB4 213 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 NDUFA4L2Q9NRX3 87 aa10.27□□□□□ -0.77
CCL28-202ENST00000489442 ZNF256Q9Y2P7 627 aaPredicted RBP10.27□□□□□ -0.77
CCL28-202ENST00000489442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.26□□□□□ -0.77
CCL28-202ENST00000489442 C15orf61A6NNL5 157 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 B3GALNT1O75752 331 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 IGKV1-39P01597 117 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 IGHV3-23P01764 117 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 IGKV1D-39P04432 117 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 FAUP35544 74 aaKnown RBP10.26□□□□□ -0.77
CCL28-202ENST00000489442 AP3S2P59780 193 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 SP6Q3SY56 376 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 SLC25A24Q6NUK1 477 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 GDPD1Q8N9F7 314 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 SCGB3A2Q96PL1 93 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 TMEM14BQ9NUH8 114 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 S4R3C0 116 aa10.26□□□□□ -0.77
CCL28-202ENST00000489442 IGLV11-55A0A075B6I3 123 aa10.25□□□□□ -0.77
CCL28-202ENST00000489442 PPP5D1E7EU14 171 aa10.25□□□□□ -0.77
CCL28-202ENST00000489442 BMPR1BO00238 502 aa10.25□□□□□ -0.77
CCL28-202ENST00000489442 WT1-ASQ06250 92 aa10.25□□□□□ -0.77
CCL28-202ENST00000489442 CLEC19AQ6UXS0 136 aa10.25□□□□□ -0.77
CCL28-202ENST00000489442 TOMM5Q8N4H5 51 aa10.25□□□□□ -0.77
CCL28-202ENST00000489442 RRNAD1Q96FB5 475 aaKnown RBP10.25□□□□□ -0.77
CCL28-202ENST00000489442 RTBDNQ9BSG5 229 aaPredicted RBP10.25□□□□□ -0.77
CCL28-202ENST00000489442 NDUFA13Q9P0J0 144 aa10.25□□□□□ -0.77
CCL28-202ENST00000489442 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
CCL28-202ENST00000489442 TRBV7-1A0A0A6YYK4 115 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 GGCTO75223 188 aaKnown RBP10.24□□□□□ -0.77
CCL28-202ENST00000489442 ARL3P36405 182 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 CCDC190Q86UF4 302 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 OR1L6Q8NGR2 347 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 PDCD10Q9BUL8 212 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 NAA60Q9H7X0 242 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 SLC2A8Q9NY64 477 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 GPR132Q9UNW8 380 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 V9GYH0 126 aa10.24□□□□□ -0.77
CCL28-202ENST00000489442 DBX1A6NMT0 343 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 OR2C1O95371 312 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 IFNA17P01571 189 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 IGKV1-5P01602 117 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 HLA-AP01891 365 aaKnown RBP10.23□□□□□ -0.77
CCL28-202ENST00000489442 CLEC3BP05452 202 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms