RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 TRAV7A0A075B6U4 112 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 GGT3PA6NGU5 568 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 J3QRE1 110 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 KLRC4O43908 158 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 PDE6DO43924 150 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 CRYZL1O95825 349 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 C1QAP02745 245 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 PRM2P04554 102 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 DEFA4P12838 97 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 PSMB8P28062 276 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 EVX1P49640 407 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 HINT1P49773 126 aaPredicted RBP1.94□□□□□ -2.1
XRN1-213ENST00000489241 HBA1P69905 142 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 RPL18Q07020 188 aaKnown RBP1.94□□□□□ -2.1
XRN1-213ENST00000489241 TAF1AQ15573 450 aaPredicted RBP1.94□□□□□ -2.1
XRN1-213ENST00000489241 LIN52Q52LA3 116 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 AADACL3Q5VUY0 350 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 TMEM42Q69YG0 159 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 LYZL1Q6UWQ5 148 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 ZNF705AQ6ZN79 300 aaPredicted RBP1.94□□□□□ -2.1
XRN1-213ENST00000489241 DYNAPQ8N1N2 210 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 OR52L1Q8NGH7 329 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 OR51A2Q8NGJ7 313 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 CXCL16Q9H2A7 254 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 NDUFB11Q9NX14 153 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 NAT8Q9UHE5 227 aa1.94□□□□□ -2.1
XRN1-213ENST00000489241 TRAV41A0A0B4J266 112 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 A0A0G2JQZ4 141 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 EXOC1LA0A1B0GW35 172 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 DPRXA6NFQ7 191 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 FAM159BA6NKW6 160 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 CREBL2O60519 120 aaPredicted RBP1.93□□□□□ -2.1
XRN1-213ENST00000489241 OR7C1O76099 320 aaPredicted RBP1.93□□□□□ -2.1
XRN1-213ENST00000489241 IGHV3-7P01780 117 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST1H2BOP23527 126 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 MSNP26038 577 aaKnown RBP1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST1H2BBP33778 126 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 PPP1R2P41236 205 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST1H2BDP58876 126 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST1H2BCP62807 126 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST2H2BEQ16778 126 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 C12orf74Q32Q52 190 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.93□□□□□ -2.1
XRN1-213ENST00000489241 C9orf64Q5T6V5 341 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 PPP1R2P3Q6NXS1 205 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 OOSP2Q86WS3 158 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 OR4X2Q8NGF9 303 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 OR13C4Q8NGS5 318 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 CT55Q8WUE5 264 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
XRN1-213ENST00000489241 ACOT12Q8WYK0 555 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST1H2BHQ93079 126 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 BTF3L4Q96K17 158 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST1H2BNQ99877 126 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 HIST1H2BMQ99879 126 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 DERL1Q9BUN8 251 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 NMNAT1Q9HAN9 279 aaPredicted RBP1.93□□□□□ -2.1
XRN1-213ENST00000489241 UQCC1Q9NVA1 299 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 TIMM9Q9Y5J7 89 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 SIPA1L1O43166 1804 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 ITGB4P16144 1822 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 DOCK6Q96HP0 2047 aa1.93□□□□□ -2.1
XRN1-213ENST00000489241 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 TMSB15BA0A087X1C1 80 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 TRAV38-1A0A0B4J264 116 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 RFPL4AA6NLU0 287 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 RFPL4AL1F8VTS6 287 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 LY6LH3BQJ8 138 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 MSMBP08118 114 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 SULT1A3P0DMM9 295 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 SULT1A4P0DMN0 295 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 NEFHP12036 1026 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 CYBAP13498 195 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 PEBP1P30086 187 aaKnown RBP1.92□□□□□ -2.1
XRN1-213ENST00000489241 S100A5P33763 92 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 HIST1H4AP62805 103 aaKnown RBP1.92□□□□□ -2.1
XRN1-213ENST00000489241 TPRXLQ17RH7 258 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 ZNF791Q3KP31 576 aaPredicted RBP1.92□□□□□ -2.1
XRN1-213ENST00000489241 IBA57Q5T440 356 aaKnown RBP1.92□□□□□ -2.1
XRN1-213ENST00000489241 GDPD1Q8N9F7 314 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 PXT1Q8NFP0 134 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 PHOSPHO2Q8TCD6 241 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 TOMM6Q96B49 74 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 KIFC1Q9BW19 673 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 MYO16Q9Y6X6 1858 aa1.92□□□□□ -2.1
XRN1-213ENST00000489241 WDR90Q96KV7 1748 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 ADAMTS7Q9UKP4 1686 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 FABP5P3A8MUU1 101 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 H7C2G1 150 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 PIRO00625 290 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 ZNF682O95780 498 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 PPBPP02775 128 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 SMIM10L2AP0DMW4 78 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 SMIM10L2BP0DMW5 78 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 EMP1P54849 157 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 KISS1Q15726 138 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 HACD4Q5VWC8 232 aa1.91□□□□□ -2.1
XRN1-213ENST00000489241 TEX36Q5VZQ5 186 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms