RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CTRB2Q6GPI1 263 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 OR4D10Q8NGI6 311 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 OR4A16Q8NH70 328 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 EEF1AKMT3Q96AZ1 226 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 TMEM56Q96MV1 263 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 DNAH3Q8TD57 4116 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 PRKDCP78527 4128 aaKnown RBP10.97□□□□□ -0.65
BRCA1-218ENST00000489037 TGP01266 2768 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.97□□□□□ -0.65
BRCA1-218ENST00000489037 TEX50A0A1B0GTY4 177 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 H0Y980 276 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 RBMXL2O75526 392 aaKnown RBP10.97□□□□□ -0.65
BRCA1-218ENST00000489037 B3GALNT1O75752 331 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 CTSDP07339 412 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-218ENST00000489037 MECP2P51608 486 aaKnown RBP10.97□□□□□ -0.65
BRCA1-218ENST00000489037 KLF5Q13887 457 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-218ENST00000489037 OR13C8Q8NGS7 320 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 OR5B3Q8NH48 314 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 MARCH1Q8TCQ1 289 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 LSM10Q969L4 123 aaKnown RBP10.97□□□□□ -0.65
BRCA1-218ENST00000489037 CXorf58Q96LI9 332 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 PRRT1Q99946 306 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 PEMTQ9UBM1 199 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 SCP2D1Q9UJQ7 156 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 ZNF256Q9Y2P7 627 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-218ENST00000489037 NSG2Q9Y328 171 aa10.97□□□□□ -0.65
BRCA1-218ENST00000489037 C3orf85A0A1B0GTC6 90 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 A0A1B0GW64 132 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 IGLC7A0M8Q6 106 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 CGB1A6NKQ9 187 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 OR13C7P0DN81 318 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 FAUP35544 74 aaKnown RBP10.96□□□□□ -0.65
BRCA1-218ENST00000489037 SYNJ2BPP57105 145 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 SURF2Q15527 256 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-218ENST00000489037 TRIM16LQ309B1 348 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 PYDC2Q56P42 97 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 OR4C16Q8NGL9 310 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 OR9G4Q8NGQ1 327 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 MRGPRFQ96AM1 343 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 SEC22AQ96IW7 307 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 SCGB3A2Q96PL1 93 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 PRR25Q96S07 402 aa10.96□□□□□ -0.65
BRCA1-218ENST00000489037 TRBV7-1A0A0A6YYK4 115 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 TEX13DA0A0J9YY54 714 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-218ENST00000489037 ANKRD20A5PA0PJZ0 165 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 C15orf61A6NNL5 157 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 GGCTO75223 188 aaKnown RBP10.95□□□□□ -0.66
BRCA1-218ENST00000489037 NDUFB8O95169 186 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 TRBV12-3P01733 135 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 AKR1C2P52895 323 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 AP3S2P59780 193 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 SLC25A24Q6NUK1 477 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 FAAP20Q6NZ36 180 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 C19orf35Q6ZS72 473 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 OR10W1Q8NGF6 305 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 OR1L6Q8NGR2 347 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 RNASE11Q8TAA1 199 aaKnown RBP10.95□□□□□ -0.66
BRCA1-218ENST00000489037 FANCD2OSQ96PS1 177 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 SOSTQ9BQB4 213 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 THAP7Q9BT49 309 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-218ENST00000489037 RBM38Q9H0Z9 239 aaKnown RBP10.95□□□□□ -0.66
BRCA1-218ENST00000489037 NDUFA4L2Q9NRX3 87 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 MCUBQ9NWR8 336 aa10.95□□□□□ -0.66
BRCA1-218ENST00000489037 IGLV11-55A0A075B6I3 123 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 KLK9Q2XQG4 91 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 GDPD1Q8N9F7 314 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 OR51S1Q8NGJ8 323 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 RRNAD1Q96FB5 475 aaKnown RBP10.94□□□□□ -0.66
BRCA1-218ENST00000489037 TP53RKQ96S44 253 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 PDCD10Q9BUL8 212 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 TMEM14BQ9NUH8 114 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 NDUFA13Q9P0J0 144 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 KLK9Q9UKQ9 250 aa10.94□□□□□ -0.66
BRCA1-218ENST00000489037 BMPR1BO00238 502 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 IGKV1-39P01597 117 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 IGHV3-23P01764 117 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 IGKV1D-39P04432 117 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 ARL3P36405 182 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 DHODHQ02127 395 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 CD69Q07108 199 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 SP6Q3SY56 376 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 SPANXN2Q5MJ10 180 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 Q8N402 240 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 TOMM5Q8N4H5 51 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 KCNIP3Q9Y2W7 256 aa10.93□□□□□ -0.66
BRCA1-218ENST00000489037 PPP5D1E7EU14 171 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 SPNP16150 400 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 UCP1P25874 307 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
BRCA1-218ENST00000489037 ERHP84090 104 aaKnown RBP10.92□□□□□ -0.66
BRCA1-218ENST00000489037 WT1-ASQ06250 92 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 SGPP2Q8IWX5 399 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 VN1R17PQ8TDU5 208 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 RTBDNQ9BSG5 229 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-218ENST00000489037 NAA60Q9H7X0 242 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 SLC2A8Q9NY64 477 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 GPR132Q9UNW8 380 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 F11RQ9Y624 299 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms