RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	SAMD12	Q8N8I0	201 aa		13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	MARCH11	A6NNE9	402 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	CYB5B	O43169	146 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	PMP2	P02689	132 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	TRAPPC2	P0DI81	140 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	TRAPPC2B	P0DI82	140 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	OR13C7	P0DN81	318 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	PTBP1	P26599	531 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	TAS2R20	P59543	309 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	LSM3	P62310	102 aa	Known RBP	13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	PLET1	Q6UQ28	207 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	GDPD1	Q8N9F7	314 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	OR5H2	Q8NGV7	314 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	IL17D	Q8TAD2	202 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	MARC2	Q969Z3	335 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	MOB3A	Q96BX8	217 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	HINT2	Q9BX68	163 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	ANAPC10	Q9UM13	185 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	UFC1	Q9Y3C8	167 aa		13.72	□□□□□ -0.21
ATG9A-222	ENST00000488833	F2R	P25116	425 aa		13.71	□□□□□ -0.21
ATG9A-222	ENST00000488833	TAS2R46	P59540	309 aa		13.71	□□□□□ -0.21
ATG9A-222	ENST00000488833	PLEC	Q15149	4684 aa	Known RBP	13.71	□□□□□ -0.21
ATG9A-222	ENST00000488833	ANKRD55	Q3KP44	614 aa		13.71	□□□□□ -0.21
ATG9A-222	ENST00000488833	ZNF585B	Q52M93	769 aa		13.71	□□□□□ -0.21
ATG9A-222	ENST00000488833	DHRS11	Q6UWP2	260 aa		13.71	□□□□□ -0.21
ATG9A-222	ENST00000488833	OR1L8	Q8NGR8	309 aa		13.71	□□□□□ -0.21
ATG9A-222	ENST00000488833	FXYD6	Q9H0Q3	95 aa		13.71	□□□□□ -0.21
ATG9A-222	ENST00000488833	TEX50	A0A1B0GTY4	177 aa		13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	TGOLN2	O43493	480 aa		13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	PGLYRP1	O75594	196 aa	Predicted RBP	13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	RPS19	P39019	145 aa	Known RBP	13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	LPAR6	P43657	344 aa		13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	WT1-AS	Q06250	92 aa		13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	SLC25A24	Q6NUK1	477 aa		13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	VN1R17P	Q8TDU5	208 aa		13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	GGTLC1	Q9BX51	225 aa		13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.7	□□□□□ -0.22
ATG9A-222	ENST00000488833	EPPK1	P58107	5090 aa	Known RBP	13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	TRAV25	A0A0B4J276	109 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	OR2T8	A6NH00	312 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	KRAS	P01116	189 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	SERPINE2	P07093	398 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	C8orf88	P0DMB2	117 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	NAT1	P18440	290 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	PRSS3	P35030	304 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	ELL	P55199	621 aa	Predicted RBP	13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	CMTM1	Q8IZ96	169 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	TSPAN14	Q8NG11	270 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	OR1L6	Q8NGR2	347 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	FCAMR	Q8WWV6	532 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	TMEM190	Q8WZ59	177 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	LSM10	Q969L4	123 aa	Known RBP	13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	DGCR14	Q96DF8	476 aa	Known RBP	13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	YIPF6	Q96EC8	236 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	VCX3A	Q9NNX9	186 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	MRPL27	Q9P0M9	148 aa	Known RBP	13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	NSG2	Q9Y328	171 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	OR51B2	Q9Y5P1	312 aa		13.69	□□□□□ -0.22
ATG9A-222	ENST00000488833	HYDIN	Q4G0P3	5121 aa		13.68	□□□□□ -0.22
ATG9A-222	ENST00000488833	IGHV3-21	A0A0B4J1V1	117 aa		13.68	□□□□□ -0.22
ATG9A-222	ENST00000488833	GPR31	O00270	319 aa		13.68	□□□□□ -0.22
ATG9A-222	ENST00000488833	JTB	O76095	146 aa		13.68	□□□□□ -0.22
ATG9A-222	ENST00000488833	HRH1	P35367	487 aa		13.68	□□□□□ -0.22
ATG9A-222	ENST00000488833	G6PC	P35575	357 aa		13.68	□□□□□ -0.22
ATG9A-222	ENST00000488833	NDUFA4L2	Q9NRX3	87 aa		13.68	□□□□□ -0.22
ATG9A-222	ENST00000488833	F11R	Q9Y624	299 aa	Known RBP	13.68	□□□□□ -0.22
ATG9A-222	ENST00000488833	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.67	□□□□□ -0.22
ATG9A-222	ENST00000488833	SNAPC5	O75971	98 aa		13.67	□□□□□ -0.22
ATG9A-222	ENST00000488833	HLA-DMA	P28067	261 aa		13.67	□□□□□ -0.22
ATG9A-222	ENST00000488833	MFAP2	P55001	183 aa		13.67	□□□□□ -0.22
ATG9A-222	ENST00000488833	OR6F1	Q8NGZ6	308 aa		13.67	□□□□□ -0.22
ATG9A-222	ENST00000488833	BSCL2	Q96G97	398 aa	Predicted RBP	13.67	□□□□□ -0.22
ATG9A-222	ENST00000488833		A0A087WXM4	84 aa		13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	EIF4E	P06730	217 aa	Known RBP	13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	PHLDA2	Q53GA4	152 aa		13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	SLC38A6	Q8IZM9	456 aa		13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	OR2C3	Q8N628	320 aa		13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	C5orf66	Q9H5L9	145 aa		13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	DAZ1	Q9NQZ3	744 aa	Known RBP	13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	C21orf62	Q9NYP8	219 aa		13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	PRND	Q9UKY0	176 aa		13.66	□□□□□ -0.22
ATG9A-222	ENST00000488833	SPSB3	Q6PJ21	355 aa		13.65	□□□□□ -0.22
ATG9A-222	ENST00000488833	CADM3	Q8N126	398 aa		13.65	□□□□□ -0.22
ATG9A-222	ENST00000488833	UBAC2	Q8NBM4	344 aa		13.65	□□□□□ -0.22
ATG9A-222	ENST00000488833	SLC25A46	Q96AG3	418 aa		13.65	□□□□□ -0.22
ATG9A-222	ENST00000488833	SPAG8	Q99932	426 aa	Predicted RBP	13.65	□□□□□ -0.22
ATG9A-222	ENST00000488833	OVOL2	Q9BRP0	275 aa		13.65	□□□□□ -0.22
ATG9A-222	ENST00000488833	CHRDL1	Q9BU40	450 aa		13.65	□□□□□ -0.22
ATG9A-222	ENST00000488833	C20orf24	Q9BUV8	137 aa		13.65	□□□□□ -0.22
ATG9A-222	ENST00000488833	IGHV3OR16-8	A0A075B7F1	116 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	C15orf61	A6NNL5	157 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833		K7EIM0	57 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	NDUFA4	O00483	81 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	S100G	P29377	79 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	TSPAN5	P62079	268 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833		Q56UQ5	140 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	LYSMD2	Q8IV50	215 aa		13.64	□□□□□ -0.23

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