RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 C2orf70A6NJV1 201 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 TRAPPC2LH3BP13 241 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 TFF1P04155 84 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 LINC00696Q6ZRV3 163 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 JMJD8Q96S16 334 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 TIMM9Q9Y5J7 89 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 MT-CO2P00403 227 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 CSN3P07498 182 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 LINC00869P0C866 280 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 PLP1P60201 277 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 CCL7P80098 99 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 RNPS1Q15287 305 aaKnown RBP13.47□□□□□ -0.25
MCF2L-229ENST00000488765 TNFRSF19Q9NS68 423 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 SCRG1O75711 98 aa13.46□□□□□ -0.25
MCF2L-229ENST00000488765 RBPJQ06330 500 aa13.46□□□□□ -0.25
MCF2L-229ENST00000488765 ABHD12Q8N2K0 398 aa13.46□□□□□ -0.25
MCF2L-229ENST00000488765 TMEM45BQ96B21 275 aa13.46□□□□□ -0.25
MCF2L-229ENST00000488765 TMEM70Q9BUB7 260 aa13.46□□□□□ -0.25
MCF2L-229ENST00000488765 MRPL27Q9P0M9 148 aaKnown RBP13.46□□□□□ -0.25
MCF2L-229ENST00000488765 C5orf49A4QMS7 147 aa13.46□□□□□ -0.26
MCF2L-229ENST00000488765 PMS2P5A8MQ11 134 aa13.46□□□□□ -0.26
MCF2L-229ENST00000488765 CER1O95813 267 aa13.46□□□□□ -0.26
MCF2L-229ENST00000488765 MT-CO3P00414 261 aa13.46□□□□□ -0.26
MCF2L-229ENST00000488765 GDF5OSQ5U4N7 250 aa13.46□□□□□ -0.26
MCF2L-229ENST00000488765 PEF1Q9UBV8 284 aaKnown RBP13.46□□□□□ -0.26
MCF2L-229ENST00000488765 A0A1B0GX78 115 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 NPIPB13A6NJU9 1138 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 C17orf98A8MV24 154 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 NPIPB4C9JG80 1138 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 TNFSF11O14788 317 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 IGLV3-19P01714 112 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 CELA2AP08217 269 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 PPIAL4GP0DN37 164 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 RHBDD2Q6NTF9 364 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 NINJ1Q92982 152 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 LSM10Q969L4 123 aaKnown RBP13.45□□□□□ -0.26
MCF2L-229ENST00000488765 KLK10O43240 276 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 RHBDL1O75783 438 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 IGHV3-43A0A0B4J1X8 118 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 LRRC30A6NM36 301 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 IGHV3-43DP0DP04 118 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 ZNF137PP52743 207 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 IBA57Q5T440 356 aaKnown RBP13.45□□□□□ -0.26
MCF2L-229ENST00000488765 ZNF788Q6ZQV5 615 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 Q8N7P7 452 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 OR4S2Q8NH73 311 aa13.45□□□□□ -0.26
MCF2L-229ENST00000488765 CDX2Q99626 313 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-229ENST00000488765 K7EMI3 77 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 SYNGR3O43761 229 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 PSG5Q15238 335 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 TRIP6Q15654 476 aaKnown RBP13.44□□□□□ -0.26
MCF2L-229ENST00000488765 MKXQ8IYA7 352 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 MTURNQ8N3F0 131 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 SPEM1Q8N4L4 309 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 OCIAD1Q9NX40 245 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 TRAV24A0A0B4J272 114 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 AMY1AP04745 511 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 CEBPDP49716 269 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-229ENST00000488765 ACP7Q6ZNF0 438 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 OR52E5Q8NH55 327 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 FAM216AQ8WUB2 273 aa13.44□□□□□ -0.26
MCF2L-229ENST00000488765 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 hCG_38984A0A1B0GV85 526 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 GCHFRP30047 84 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 C12orf54Q6X4T0 127 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 RFESDQ8TAC1 157 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 MS4A5Q9H3V2 200 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 TNCP24821 2201 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 PRR14LQ5THK1 2151 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 PPIAL4CA0A0B4J2A2 164 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 A0A1W2PQM1 296 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 BLACEA4D250 179 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 CRYGSP22914 178 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 LYSMD4Q5XG99 296 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 WDR73Q6P4I2 378 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 PRSS57Q6UWY2 283 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 ZNF441Q8N8Z8 693 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 TEX45Q8NA69 505 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 LIN7CQ9NUP9 197 aaKnown RBP13.43□□□□□ -0.26
MCF2L-229ENST00000488765 TNRC6AQ8NDV7 1962 aaKnown RBP13.43□□□□□ -0.26
MCF2L-229ENST00000488765 ICE1Q9Y2F5 2266 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 NDUFS8O00217 210 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 H2BFWTQ7Z2G1 175 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 TPRX1Q8N7U7 411 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 HINT2Q9BX68 163 aa13.43□□□□□ -0.26
MCF2L-229ENST00000488765 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-229ENST00000488765 SPENQ96T58 3664 aaKnown RBP13.42□□□□□ -0.26
MCF2L-229ENST00000488765 GPR183P32249 361 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 PTGDSP41222 190 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 RAB9AP51151 201 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 TIGITQ495A1 244 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 HEYLQ9NQ87 328 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-229ENST00000488765 TEX48A0A1B0GUV7 120 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 MIR17HGQ75NE6 70 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 TMEM251Q8N6I4 163 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 SCCPDHQ8NBX0 429 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 PLCE1Q9P212 2302 aa13.42□□□□□ -0.26
MCF2L-229ENST00000488765 CXorf1O96002 111 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 NGFP01138 241 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 HTR1DP28221 377 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms