RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 IGHV4-30-4P0DP06 118 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 PI3P19957 117 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 TBPP20226 339 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 EDN2P20800 178 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 ADAMTSL5Q6ZMM2 481 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 HSD17B13Q7Z5P4 300 aaPredicted RBP13.47□□□□□ -0.25
ITGB1-215ENST00000488494 SBSPONQ8IVN8 264 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 Q8N402 240 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 ARRDC1Q8N5I2 433 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 DYNLRB2Q8TF09 96 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 LSM10Q969L4 123 aaKnown RBP13.47□□□□□ -0.25
ITGB1-215ENST00000488494 CXorf58Q96LI9 332 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 FAM212BQ9NTI7 297 aaPredicted RBP13.47□□□□□ -0.25
ITGB1-215ENST00000488494 CCDC59Q9P031 241 aaKnown RBP13.47□□□□□ -0.25
ITGB1-215ENST00000488494 PRNDQ9UKY0 176 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 TRBV7-1A0A0A6YYK4 115 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 DBX1A6NMT0 343 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 CTDSP2O14595 271 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 TPPPO94811 219 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 GPR183P32249 361 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 SGPP2Q8IWX5 399 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 Q8N1Y9 231 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 OR4D10Q8NGI6 311 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 C15orf40Q8WUR7 153 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 MRGPRFQ96AM1 343 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 ZC4H2Q9NQZ6 224 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 NDUFA4L2Q9NRX3 87 aa13.46□□□□□ -0.25
ITGB1-215ENST00000488494 C2orf70A6NJV1 201 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 C15orf61A6NNL5 157 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 NOL3O60936 208 aaKnown RBP13.45□□□□□ -0.26
ITGB1-215ENST00000488494 IGKV1-39P01597 117 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 IGKV1D-39P04432 117 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 SERPINE2P07093 398 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 MECP2P51608 486 aaKnown RBP13.45□□□□□ -0.26
ITGB1-215ENST00000488494 TMBIM6P55061 237 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 GTSCR1Q86UQ5 136 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 LHFPL1Q86WI0 220 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 CADM3Q8N126 398 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 ZNF502Q8TBZ5 544 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 DYNC2LI1Q8TCX1 351 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 CACNG8Q8WXS5 425 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 SEC22AQ96IW7 307 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 TSC22D3Q99576 134 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 THAP7Q9BT49 309 aaPredicted RBP13.45□□□□□ -0.26
ITGB1-215ENST00000488494 TMEM14BQ9NUH8 114 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 THYN1Q9P016 225 aa13.45□□□□□ -0.26
ITGB1-215ENST00000488494 KMT2CQ8NEZ4 4911 aaKnown RBP13.44□□□□□ -0.26
ITGB1-215ENST00000488494 GABARAPH6UMI1 98 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 LGALS9O00182 355 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 CYB5BO43169 146 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 CD74P04233 296 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 FOLR2P14207 255 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 PIGPP57054 158 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 TAS2R19P59542 299 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 RND3P61587 244 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 CD300EQ496F6 205 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-215ENST00000488494 SCGB2B2Q4G0G5 96 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 H2BFWTQ7Z2G1 175 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 GPHB5Q86YW7 130 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 TMEM229BQ8NBD8 167 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 OR2K2Q8NGT1 345 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 ZNF486Q96H40 463 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-215ENST00000488494 BCL7BQ9BQE9 202 aa13.44□□□□□ -0.26
ITGB1-215ENST00000488494 F11RQ9Y624 299 aaKnown RBP13.44□□□□□ -0.26
ITGB1-215ENST00000488494 ZNF320A2RRD8 509 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 A8MWP6 167 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 RAB3DO95716 219 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 CLEC3BP05452 202 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 PTBP1P26599 531 aaKnown RBP eCLIP13.43□□□□□ -0.262e-10■■■□□ 15.4
ITGB1-215ENST00000488494 MFAP2P55001 183 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 MRPS10P82664 201 aaKnown RBP13.43□□□□□ -0.26
ITGB1-215ENST00000488494 FAAP20Q6NZ36 180 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 STEAP1BQ6NZ63 245 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 OR13C8Q8NGS7 320 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 SMIM4Q8WVI0 70 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 RCHY1Q96PM5 261 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 C6orf62Q9GZU0 229 aaPredicted RBP13.43□□□□□ -0.26
ITGB1-215ENST00000488494 FKBP11Q9NYL4 201 aa13.43□□□□□ -0.26
ITGB1-215ENST00000488494 HUWE1Q7Z6Z7 4374 aaKnown RBP13.43□□□□□ -0.26
ITGB1-215ENST00000488494 TMEM213A2RRL7 107 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 H3BMQ9 156 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 RPL5P46777 297 aaKnown RBP13.42□□□□□ -0.26
ITGB1-215ENST00000488494 IL18Q14116 193 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 FAM106AQ4KMX7 169 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 SLC25A24Q6NUK1 477 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 OR4A16Q8NH70 328 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 VN1R17PQ8TDU5 208 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 ISOC1Q96CN7 298 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 TMEM56Q96MV1 263 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 TP53RKQ96S44 253 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 C19orf73Q9NVV2 129 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 SELENOKQ9Y6D0 94 aa13.42□□□□□ -0.26
ITGB1-215ENST00000488494 IGHV3-21A0A0B4J1V1 117 aa13.41□□□□□ -0.26
ITGB1-215ENST00000488494 IGHV3-35A0A0C4DH35 117 aa13.41□□□□□ -0.26
ITGB1-215ENST00000488494 OR2T8A6NH00 312 aa13.41□□□□□ -0.26
ITGB1-215ENST00000488494 CD81P60033 236 aa13.41□□□□□ -0.26
ITGB1-215ENST00000488494 SSBP1Q04837 148 aaKnown RBP13.41□□□□□ -0.26
ITGB1-215ENST00000488494 DEFB114Q30KQ6 69 aa13.41□□□□□ -0.26
ITGB1-215ENST00000488494 UNQ9165/PRO28630Q6UXU0 137 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms