RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 POU6F1Q14863 301 aa2.52□□□□□ -2.01
CUL3-211ENST00000487558 GRK1Q15835 563 aa2.52□□□□□ -2.01
CUL3-211ENST00000487558 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
CUL3-211ENST00000487558 TRIQKQ629K1 86 aa2.52□□□□□ -2.01
CUL3-211ENST00000487558 LYZL1Q6UWQ5 148 aa2.52□□□□□ -2.01
CUL3-211ENST00000487558 TIMM9Q9Y5J7 89 aa2.52□□□□□ -2.01
CUL3-211ENST00000487558 ZNF407Q9C0G0 2248 aa2.52□□□□□ -2.01
CUL3-211ENST00000487558 ATG2BQ96BY7 2078 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 DOCK6Q96HP0 2047 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 LOC105371267A0A1B0GV96 52 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 ARRDC5A6NEK1 342 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 OR2B3O76000 313 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 CNIH1O95406 144 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 ACOT6Q3I5F7 207 aaPredicted RBP2.51□□□□□ -2.01
CUL3-211ENST00000487558 S100A7AQ86SG5 101 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 C20orf196Q8IYI0 205 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 OR6V1Q8N148 313 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 LRRC25Q8N386 305 aaPredicted RBP2.51□□□□□ -2.01
CUL3-211ENST00000487558 OR51T1Q8NGJ9 327 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 OR2T4Q8NH00 348 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 DCUN1D1Q96GG9 259 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 BTF3L4Q96K17 158 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 IMMP2LQ96T52 175 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 NIPSNAP1Q9BPW8 284 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 BATF3Q9NR55 127 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 FBXO5Q9UKT4 447 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 RBM7Q9Y580 266 aaKnown RBP2.51□□□□□ -2.01
CUL3-211ENST00000487558 SIPA1L1O43166 1804 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 VIRMAQ69YN4 1812 aaKnown RBP2.51□□□□□ -2.01
CUL3-211ENST00000487558 NCOA1Q15788 1441 aa2.51□□□□□ -2.01
CUL3-211ENST00000487558 PCF11O94913 1555 aaKnown RBP2.5□□□□□ -2.01
CUL3-211ENST00000487558 PQLC2LA1A4F0 135 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 SMIM9A6NGZ8 99 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 J3QQQ9 107 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 S1PR2O95136 353 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 RPL26P61254 145 aaKnown RBP2.5□□□□□ -2.01
CUL3-211ENST00000487558 EDDM3AQ14507 147 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 DHRS4L2Q6PKH6 230 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 LYG2Q86SG7 212 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 OR10X1Q8NGY0 326 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 TAS2R7Q9NYW3 318 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 RPL26L1Q9UNX3 145 aaKnown RBP2.5□□□□□ -2.01
CUL3-211ENST00000487558 FUT9Q9Y231 359 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 TRPM6Q9BX84 2022 aa2.5□□□□□ -2.01
CUL3-211ENST00000487558 NYNRINQ9P2P1 1898 aaKnown RBP2.5□□□□□ -2.01
CUL3-211ENST00000487558 IGLV3-9A0A075B6K5 115 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 IGHV3-64A0A075B6Q5 118 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 A0A0G2JQZ4 141 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 A0A0J9YY10 115 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 A0A1B0GX78 115 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 RFPL4AA6NLU0 287 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 RFPL4AL1F8VTS6 287 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 LEPROTO15243 131 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 NOS1APO75052 506 aaPredicted RBP2.49□□□□□ -2.01
CUL3-211ENST00000487558 TMEM258P61165 79 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 HES1Q14469 280 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 LIN52Q52LA3 116 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 TMEM97Q5BJF2 176 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 TMEM42Q69YG0 159 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 ZNF705AQ6ZN79 300 aaPredicted RBP2.49□□□□□ -2.01
CUL3-211ENST00000487558 Q6ZS49 121 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 Q6ZTI0 123 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 Q8NDZ9 215 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 DCANP1Q8TF63 244 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 C6orf62Q9GZU0 229 aaPredicted RBP2.49□□□□□ -2.01
CUL3-211ENST00000487558 PRTFDC1Q9NRG1 225 aa2.49□□□□□ -2.01
CUL3-211ENST00000487558 ADGRB3O60242 1522 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 TRBV20OR9-2A0A075B6H5 130 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 H3BT86 120 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 HMGN1P05114 100 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 MSMBP08118 114 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 CST2P09228 141 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 LGALS1P09382 135 aaKnown RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 HIST1H1TP22492 207 aaPredicted RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 PEBP1P30086 187 aaKnown RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 SNRPD2P62316 118 aaKnown RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 HIST1H4AP62805 103 aaKnown RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 RELAQ04206 551 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 C9orf64Q5T6V5 341 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 C3orf33Q6P1S2 294 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 SLC36A1Q7Z2H8 476 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 RNASE11Q8TAA1 199 aaKnown RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 SLC7A6Q92536 515 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 HOPXQ9BPY8 73 aaPredicted RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 CMSS1Q9BQ75 279 aaKnown RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 KIFC1Q9BW19 673 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 DDA1Q9BW61 102 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 TRIM4Q9C037 500 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 COMMD5Q9GZQ3 224 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 WDR61Q9GZS3 305 aaKnown RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 PCBD2Q9H0N5 130 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 EFCAB1Q9HAE3 211 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 NMNAT1Q9HAN9 279 aaPredicted RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 CMTM6Q9NX76 183 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 TIMM22Q9Y584 194 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 RTEL1-TNFRSF6BF6WH68 1400 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 WDR90Q96KV7 1748 aa2.48□□□□□ -2.01
CUL3-211ENST00000487558 DHX57Q6P158 1386 aaKnown RBP2.48□□□□□ -2.01
CUL3-211ENST00000487558 TRAV7A0A075B6U4 112 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms